Revision history for YongWang
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[[http://wanglab.amss.ac.cn WangLab: Welcome to visit my Optimization and Computational Systems Biology Lab]]
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WangLab: [[http://wanglab.amss.ac.cn Welcome to visit my Optimization and Computational Systems Biology Lab]]
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Additions:
[[http://wanglab.amss.ac.cn Welcome to visit my Optimization and Computational Systems Biology Lab]]
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~- {{files download="YongWangVitaeChinese2013.pdf" text="科研简历 (PDF)"}}
~- {{files download="YongWangVitae2013.pdf" text="Curriculum Vitae (PDF)"}}
~- {{files download="YongWangVitae2013.pdf" text="Curriculum Vitae (PDF)"}}
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~- {{files download="YongWangVitae2017.pdf" text="Curriculum Vitae (PDF)"}}
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{{files}}
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Tel: +86(10)-82541372
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Professor of [[http://www.amt.ac.cn Institute of Applied Mathematics]], [[http://www.amss.ac.cn Academy of Mathematics and Systems Science]], [[http://www.cas.ac.cn Chinese Academy of Sciences]]
研究员, [[http://www.amt.ac.cn 应用数学研究所]], [[http://www.amss.ac.cn 数学与系统科学研究院]], [[http://www.cas.ac.cn 中国科学院]]
~- {{files download="YongWangVitaeChinese2017.pdf" text="科研简历 (PDF)"}}
~- {{files download="YongWangVitae2017.pdf" text="Curriculum Vitae (PDF)"}}
~- **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**, Rui Jiang, and Wing Hung Wong. ---**[[http://nsr.oxfordjournals.org/content/early/2016/04/19/nsr.nww025 Modeling the causal regulatory network by integrating chromatin accessibility and transcriptome data]]**--- //National Science Review//. 3(2),240-251, 2016.
~- Meng Zou, Peng-Jun Zhang, Luonan Chen, Ya-Ping Tian, and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[https://www.ncbi.nlm.nih.gov/pubmed/27172589 Identifying joint biomarker panel from multiple level dataset by an optimization model]]**--- //Biomarkers in Medicine//. 10(6),567-575. 2016.
~- Duren Zhana, **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://www.nature.com/articles/srep22656 A systematic method to identify modulation of transcriptional regulation via chromatin activity reveals regulatory network during mESC differentiation]]**--- //Scientific Report//. 6, 2016.
~- Yongcui Wang, Nai-Yang Deng, Shi-Long Chen, and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://http://bioinformatics.oxfordjournals.org/ Computational probing protein-protein interactions targeting small molecules]]**--- //Bioinformatics//. 32: 226-234, 2016.
~- **[[http://zhangroup.aporc.org/MengZou Meng Zou]]**, Zhaoqi Liu, **[[http://zhangroup.aporc.org/XiangsunZhang Xiang-Sun Zhang]]**, and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://bioinformatics.oxfordjournals.org/content/early/2015/07/08/bioinformatics.btv374.full NCC-AUC: an AUC optimization method to identify multi-biomarker panel for cancer prognosis from genomic and clinical data]]**--- //Bioinformatics//. 31 (20), 3330-3338, 2015.
研究员, [[http://www.amt.ac.cn 应用数学研究所]], [[http://www.amss.ac.cn 数学与系统科学研究院]], [[http://www.cas.ac.cn 中国科学院]]
~- {{files download="YongWangVitaeChinese2017.pdf" text="科研简历 (PDF)"}}
~- {{files download="YongWangVitae2017.pdf" text="Curriculum Vitae (PDF)"}}
~- **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**, Rui Jiang, and Wing Hung Wong. ---**[[http://nsr.oxfordjournals.org/content/early/2016/04/19/nsr.nww025 Modeling the causal regulatory network by integrating chromatin accessibility and transcriptome data]]**--- //National Science Review//. 3(2),240-251, 2016.
~- Meng Zou, Peng-Jun Zhang, Luonan Chen, Ya-Ping Tian, and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[https://www.ncbi.nlm.nih.gov/pubmed/27172589 Identifying joint biomarker panel from multiple level dataset by an optimization model]]**--- //Biomarkers in Medicine//. 10(6),567-575. 2016.
~- Duren Zhana, **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://www.nature.com/articles/srep22656 A systematic method to identify modulation of transcriptional regulation via chromatin activity reveals regulatory network during mESC differentiation]]**--- //Scientific Report//. 6, 2016.
~- Yongcui Wang, Nai-Yang Deng, Shi-Long Chen, and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://http://bioinformatics.oxfordjournals.org/ Computational probing protein-protein interactions targeting small molecules]]**--- //Bioinformatics//. 32: 226-234, 2016.
~- **[[http://zhangroup.aporc.org/MengZou Meng Zou]]**, Zhaoqi Liu, **[[http://zhangroup.aporc.org/XiangsunZhang Xiang-Sun Zhang]]**, and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://bioinformatics.oxfordjournals.org/content/early/2015/07/08/bioinformatics.btv374.full NCC-AUC: an AUC optimization method to identify multi-biomarker panel for cancer prognosis from genomic and clinical data]]**--- //Bioinformatics//. 31 (20), 3330-3338, 2015.
Deletions:
副研究员, [[http://www.amt.ac.cn 应用数学研究所]], [[http://www.amss.ac.cn 数学与系统科学研究院]], [[http://www.cas.ac.cn 中国科学院]]
~- {{files download="YongWangVitaeChinese2013.pdf" text="科研简历 (PDF)"}}
~- {{files download="YongWangVitae2013.pdf" text="Curriculum Vitae (PDF)"}}
~- Yongcui Wang, Nai-Yang Deng, Shi-Long Chen, and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://http://bioinformatics.oxfordjournals.org/ Computational probing protein-protein interactions targeting small molecules]]**--- //Bioinformatics//. in press, 2015.
~- **[[http://zhangroup.aporc.org/MengZou Meng Zou]]**, Zhaoqi Liu, **[[http://zhangroup.aporc.org/XiangsunZhang Xiang-Sun Zhang]]**, and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://bioinformatics.oxfordjournals.org/content/early/2015/07/08/bioinformatics.btv374.full NCC-AUC: an AUC optimization method to identify multi-biomarker panel for cancer prognosis from genomic and clinical data]]**--- //Bioinformatics//. in press, 2015.
No Differences
Additions:
~- [[http://web.stanford.edu/group/wonglab/ Wonglab]]
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~- Full list of paper can be found [[http://scholar.google.com/citations?hl=en&user=M0fnh30AAAAJ Google Scholar]] or [[http://zhangroup.aporc.org/YongWang/files.xml?action=download&file=Yong+Wang+Vitae.pdf Here]]. Papers in bioinformatics and systems biology can be found in [[http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=DetailsSearch&term=Yong+Wang+Academy+of+Mathematics+and+Systems+Science PubMed]]
Deletions:
Additions:
~- Full list of paper can be found [[http://scholar.google.com/citations?hl=en&user=M0fnh30AAAAJ Google Scholar]] or[[http://zhangroup.aporc.org/YongWang/files.xml?action=download&file=Yong+Wang+Vitae.pdf Here]]. Papers in bioinformatics and systems biology can be found in [[http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=DetailsSearch&term=Yong+Wang+Academy+of+Mathematics+and+Systems+Science PubMed]]
Deletions:
Additions:
~- Pengjun Zhang, **[[http://zhangroup.aporc.org/MengZou Meng Zou]]**, Xinyu Wen, Feng Gu, Juan Li, Gaixia Liu, Jingxiao Dong, Xinxin Deng, Jing Gao, Xiaolong Li, Xingwang Jia, Zhennan Dong, Luonan Chen, **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**, Yaping Tian. --- **[[http://onlinelibrary.wiley.com/doi/10.1002/ijc.28584/abstract Development of Serum Parameters Panels for the Early Detection of Pancreatic Cancer]]** --- //International Journal of Cancer//, 134(11):2646-55, 2014.
~- **[[http://zhangroup.aporc.org/LinWang Lin Wang]]**, **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**, Qinghua Hu, Shao Li. ---**[[http://www.nature.com/psp/journal/v3/n11/full/psp201444a.html Systematic analysis of new drug indications by drug-gene-disease coherent subnetworks ]].**--- //CPT: Pharmacometrics & Systems Pharmacology//, 3, e146; 2014.
~- **[[http://zhangroup.aporc.org/LinWang Lin Wang]]**, **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**, Qinghua Hu, Shao Li. ---**[[http://www.nature.com/psp/journal/v3/n11/full/psp201444a.html Systematic analysis of new drug indications by drug-gene-disease coherent subnetworks ]].**--- //CPT: Pharmacometrics & Systems Pharmacology//, 3, e146; 2014.
Additions:
~- Yongcui Wang, Nai-Yang Deng, Shi-Long Chen, and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://http://bioinformatics.oxfordjournals.org/ Computational probing protein-protein interactions targeting small molecules]]**--- //Bioinformatics//. in press, 2015.
~- **[[http://zhangroup.aporc.org/MengZou Meng Zou]]**, Zhaoqi Liu, **[[http://zhangroup.aporc.org/XiangsunZhang Xiang-Sun Zhang]]**, and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://bioinformatics.oxfordjournals.org/content/early/2015/07/08/bioinformatics.btv374.full NCC-AUC: an AUC optimization method to identify multi-biomarker panel for cancer prognosis from genomic and clinical data]]**--- //Bioinformatics//. in press, 2015.
~- **[[http://zhangroup.aporc.org/MengZou Meng Zou]]**, Pengjun Zhang, Xin-Yu Wen, Luonan Chen, Yaping Tian, and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://www.sciencedirect.com/science/article/pii/S1046202315002042 A novel mixed integer programming for multi-biomarker panel identification by distinguishing malignant from benign colorectal tumors]]**--- //Methods//. Vol. 83, 3–17, 2015.
~- **[[http://zhangroup.aporc.org/JinxueXin Jingxue Xin]]**, **[[http://zhangroup.aporc.org/XianwenRen Xianwen Ren]]**, Luonan Chen and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://www.biomedcentral.com/1755-8794/8/S2/S11/abstract Identifying network biomarkers based on protein-protein interactions and expression data]]**--- //BMC Medical Genomics//, 8(Suppl 2):S11, 2015
~- **[[http://zhangroup.aporc.org/MengZou Meng Zou]]**, Zhaoqi Liu, **[[http://zhangroup.aporc.org/XiangsunZhang Xiang-Sun Zhang]]**, and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://bioinformatics.oxfordjournals.org/content/early/2015/07/08/bioinformatics.btv374.full NCC-AUC: an AUC optimization method to identify multi-biomarker panel for cancer prognosis from genomic and clinical data]]**--- //Bioinformatics//. in press, 2015.
~- **[[http://zhangroup.aporc.org/MengZou Meng Zou]]**, Pengjun Zhang, Xin-Yu Wen, Luonan Chen, Yaping Tian, and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://www.sciencedirect.com/science/article/pii/S1046202315002042 A novel mixed integer programming for multi-biomarker panel identification by distinguishing malignant from benign colorectal tumors]]**--- //Methods//. Vol. 83, 3–17, 2015.
~- **[[http://zhangroup.aporc.org/JinxueXin Jingxue Xin]]**, **[[http://zhangroup.aporc.org/XianwenRen Xianwen Ren]]**, Luonan Chen and **[[http://zhangroup.aporc.org/YongWang Yong Wang]]**. ---**[[http://www.biomedcentral.com/1755-8794/8/S2/S11/abstract Identifying network biomarkers based on protein-protein interactions and expression data]]**--- //BMC Medical Genomics//, 8(Suppl 2):S11, 2015
Additions:
~- {{files download="YongWangVitaeChinese2013.pdf" text="科研简历 (PDF)"}}
~- {{files download="YongWangVitae2013.pdf" text="Curriculum Vitae (PDF)"}}
~- {{files download="YongWangVitae2013.pdf" text="Curriculum Vitae (PDF)"}}
Deletions:
~- {{files download="YongWangVitae2011.pdf" text="Curriculum Vitae (PDF)"}}
Additions:
~- Shao-Yan Sun, Tao Zeng, Zhi-Ping Liu, Yong Wang*, and Luonan Chen*. --- ** [[http://www.nature.com/srep/2013/130724/srep02268/full/srep02268.html Spatio-temporal analysis of type 2 diabetes mellitus based on differential expression networks. ]]**--- //Scientific Report//, 3, 2268; 2013.
~- Xianwen Ren, Yong Wang*, Xiang-Sun Zhang, and Qi Jin.--- ** [[http://nar.oxfordjournals.org/content/early/2013/06/12/nar.gkt343.full iPcc: a novel feature extraction method for accurate disease class discovery and prediction.]]**--- //Nucleic Acids Research//. 2013 Vol. 41, No. 4, e143.
~- Xianwen Ren, Yong Wang*, Xiang-Sun Zhang, and Qi Jin.--- ** [[http://nar.oxfordjournals.org/content/early/2013/06/12/nar.gkt343.full iPcc: a novel feature extraction method for accurate disease class discovery and prediction.]]**--- //Nucleic Acids Research//. 2013 Vol. 41, No. 4, e143.
Deletions:
~- Xianwen Ren, Yong Wang*, Xiang-Sun Zhang, and Qi Jin.--- ** [[iPcc: a novel feature extraction method for accurate disease class discovery and prediction.]]**--- //Nucleic Acids Research//. 2013 Vol. 41, No. 4, e143.
Additions:
~- Shao-Yan Sun, Tao Zeng, Zhi-Ping Liu, Yong Wang*, and Luonan Chen*. --- ** [[Spatio-temporal analysis of type 2 diabetes mellitus based on differential expression networks. ]]**--- //Scientific Report//, 3, 2268; 2013.
~- Xianwen Ren, Yong Wang*, Xiang-Sun Zhang, and Qi Jin.--- ** [[iPcc: a novel feature extraction method for accurate disease class discovery and prediction.]]**--- //Nucleic Acids Research//. 2013 Vol. 41, No. 4, e143.
~-Yong Wang, Katsuhisa Horimoto, Luonan Chen. ---**[[http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6001633&tag=1 An Integrated Pipeline for Gene Regulatory Network Inference]]**---//Proceedings of The 30th Chinese Control Conference (CCC)//, pp. 6593-6598, 2011. {{files download="Pipeline.pdf" text="PDF"}}
~- Xianwen Ren, Yong Wang*, Xiang-Sun Zhang, and Qi Jin.--- ** [[iPcc: a novel feature extraction method for accurate disease class discovery and prediction.]]**--- //Nucleic Acids Research//. 2013 Vol. 41, No. 4, e143.
~-Yong Wang, Katsuhisa Horimoto, Luonan Chen. ---**[[http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6001633&tag=1 An Integrated Pipeline for Gene Regulatory Network Inference]]**---//Proceedings of The 30th Chinese Control Conference (CCC)//, pp. 6593-6598, 2011. {{files download="Pipeline.pdf" text="PDF"}}
Deletions:
~-Yong Wang,Katsuhisa Horimoto, Luonan Chen. ---**[[http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6001633&tag=1 An Integrated Pipeline for Gene Regulatory Network Inference]]**---//Proceedings of The 30th Chinese Control Conference (CCC)//, pp. 6593-6598, 2011. {{files download="Pipeline.pdf" text="PDF"}}
Additions:
~- Xianwen Ren, Yong Wang*, Xiang-Sun Zhang, and Qi Jin.--- ** [[iPcc: a novel feature extraction method for accurate disease class discovery and prediction.]]**--- //Nucleic Acids Research//. 2013 in press.
Deletions:
Additions:
~- Yongcui Wang, Nai-Yang Deng, Shi-Long Chen, Yong Wang*. --- ** [[http://bioinformatics.oxfordjournals.org/content/early/2013/04/04/bioinformatics.btt158.long Network predicting drug's anatomical therapeutic chemical code. ]]**--- //Bioinformatics//, 2013 29: 1317-1324.
~- Yong Wang. --- ** [[http://www.ingentaconnect.com/content/ben/cbio/2013/00000008/00000001/art00013 Bioinformatics studies on induced pluripotent stem cell. ]]**--- //Current Bioinformatics//, 2013, Vol. 8. No. 1. 80--87. {{files download="CurrentBIO2013.pdf" text="PDF"}}
~- Yong Wang. --- ** [[http://www.ingentaconnect.com/content/ben/cbio/2013/00000008/00000001/art00013 Bioinformatics studies on induced pluripotent stem cell. ]]**--- //Current Bioinformatics//, 2013, Vol. 8. No. 1. 80--87. {{files download="CurrentBIO2013.pdf" text="PDF"}}
Deletions:
Additions:
~- Xianwen Ren, Yong Wang*, Luonan Chen, Xiang-Sun Zhang, and Qi Jin.--- ** [[iPcc: a novel feature extraction method for accurate disease class discovery and prediction.]]**--- //Nucleic Acids Research//. 2013 in press.
~- Yongcui Wang, Nai-Yang Deng, Shi-Long Chen, Yong Wang*. --- ** [[http://bioinformatics.oxfordjournals.org/content/early/2013/04/04/bioinformatics.btt158.long Network predicting drug's anatomical therapeutic chemical code. ]]**--- //Bioinformatics//, 2013, doi: 10.1093/bioinformatics/btt158
~- Xianwen Ren, Yong Wang*, Luonan Chen, Xiang-Sun Zhang, and Qi Jin.--- ** [[http://nar.oxfordjournals.org/content/41/4/e53.long ellipsoidFN: a tool for identifying a heterogeneous set of cancer biomarkers based on gene expressions]]**--- //Nucleic Acids Research//. 2013 41(4): e53.
~- Duren Zhana, Yong Wang*, Shigeru Saito, Katsuhisa Horimoto. --- ** [[http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6391257&tag=1 Inferring Gene Regulatory Network for Cell Reprogramming]]**---//Proceedings of The 31th Chinese Control Conference (CCC)//, pp. 7437-7442, 2012. {{files download="GRNiPSCCCC2012.pdf" text="PDF"}}
~- Yongcui Wang, Nai-Yang Deng, Shi-Long Chen, Yong Wang*. --- ** [[http://bioinformatics.oxfordjournals.org/content/early/2013/04/04/bioinformatics.btt158.long Network predicting drug's anatomical therapeutic chemical code. ]]**--- //Bioinformatics//, 2013, doi: 10.1093/bioinformatics/btt158
~- Xianwen Ren, Yong Wang*, Luonan Chen, Xiang-Sun Zhang, and Qi Jin.--- ** [[http://nar.oxfordjournals.org/content/41/4/e53.long ellipsoidFN: a tool for identifying a heterogeneous set of cancer biomarkers based on gene expressions]]**--- //Nucleic Acids Research//. 2013 41(4): e53.
~- Duren Zhana, Yong Wang*, Shigeru Saito, Katsuhisa Horimoto. --- ** [[http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6391257&tag=1 Inferring Gene Regulatory Network for Cell Reprogramming]]**---//Proceedings of The 31th Chinese Control Conference (CCC)//, pp. 7437-7442, 2012. {{files download="GRNiPSCCCC2012.pdf" text="PDF"}}
Deletions:
~- Duren Zhana, Yong Wang*, Shigeru Saito, Katsuhisa Horimoto. .--- ** [[http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6391257&tag=1 Inferring Gene Regulatory Network for Cell Reprogramming]]**---//Proceedings of The 31th Chinese Control Conference (CCC)//, pp. 7437-7442, 2012. {{files download="GRNiPSCCCC2012.pdf" text="PDF"}}
Additions:
~- Xianwen Ren, Yong Wang*, Luonan Chen, Xiang-Sun Zhang, and Qi Jin.[[http://nar.oxfordjournals.org/content/41/4/e53.long ellipsoidFN: a tool for identifying a heterogeneous set of cancer biomarkers based on gene expressions]] //Nucleic Acids Research//. 2013 41: e53.
~- Duren Zhana, Yong Wang*, Shigeru Saito, Katsuhisa Horimoto. .--- ** [[http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6391257&tag=1 Inferring Gene Regulatory Network for Cell Reprogramming]]**---//Proceedings of The 31th Chinese Control Conference (CCC)//, pp. 7437-7442, 2012. {{files download="GRNiPSCCCC2012.pdf" text="PDF"}}
~- Yong Wang*, Qiao-Feng Wu, Chen Chen, Ling-Yun Wu, Xian-Zhong Yan, Shu-Guang Yu, Xiang-Sun Zhang, and Fan-Rong Liang.--- ** [[http://www.biomedcentral.com/1752-0509/6/S1/S15/abstract Revealing metabolite biomarkers for acupuncture treatment by linear programming based feature selection]]**---//BMC Systems Biology//, 6(Suppl 1):S15, 2012.
~- Xianwen Ren, Yong Wang*, Jiguang Wang and Xiang-Sun Zhang. ---**[[http://www.biomedcentral.com/1471-2105/13/70 A unified computational model for revealing and predicting subtle subtypes of cancers]]**---//BMC Bioinformatics//, 13:70, 2012.
~- Duren Zhana, Yong Wang*, Shigeru Saito, Katsuhisa Horimoto. .--- ** [[http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6391257&tag=1 Inferring Gene Regulatory Network for Cell Reprogramming]]**---//Proceedings of The 31th Chinese Control Conference (CCC)//, pp. 7437-7442, 2012. {{files download="GRNiPSCCCC2012.pdf" text="PDF"}}
~- Yong Wang*, Qiao-Feng Wu, Chen Chen, Ling-Yun Wu, Xian-Zhong Yan, Shu-Guang Yu, Xiang-Sun Zhang, and Fan-Rong Liang.--- ** [[http://www.biomedcentral.com/1752-0509/6/S1/S15/abstract Revealing metabolite biomarkers for acupuncture treatment by linear programming based feature selection]]**---//BMC Systems Biology//, 6(Suppl 1):S15, 2012.
~- Xianwen Ren, Yong Wang*, Jiguang Wang and Xiang-Sun Zhang. ---**[[http://www.biomedcentral.com/1471-2105/13/70 A unified computational model for revealing and predicting subtle subtypes of cancers]]**---//BMC Bioinformatics//, 13:70, 2012.
Deletions:
~- Yong Wang, Qiao-Feng Wu, Chen Chen, Ling-Yun Wu, Xian-Zhong Yan, Shu-Guang Yu, Xiang-Sun Zhang, and Fan-Rong Liang.--- ** [[http://www.biomedcentral.com/1752-0509/6/S1/S15/abstract Revealing metabolite biomarkers for acupuncture treatment by linear programming based feature selection]]**---//BMC Systems Biology//, 6(Suppl 1):S15, 2012.
~- Xianwen Ren, Yong Wang, Jiguang Wang and Xiang-Sun Zhang. ---**[[http://www.biomedcentral.com/1471-2105/13/70 A unified computational model for revealing and predicting subtle subtypes of cancers]]**---//BMC Bioinformatics//, 13:70, 2012.
Additions:
~- [[http://www.researcherid.com/rid/J-9193-2012 My Research ID]]
Additions:
~- [[http://doc.aporc.org/wiki/NetPredATC NetPredATC: Network Network Predicting Drug's ATC Code]]
Additions:
~- Duren Zhana, Yong Wang, Shigeru Saito, Katsuhisa Horimoto. .--- ** [[Inferring Gene Regulatory Network for Cell Reprogramming]]**---//Proceedings of The 31th Chinese Control Conference (CCC)//, pp. 7437-7442, 2012. {{files download="GRNiPSCCCC2012.pdf" text="PDF"}}
~-Yong Wang,Katsuhisa Horimoto, Luonan Chen. ---**[[http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6001633&tag=1 An Integrated Pipeline for Gene Regulatory Network Inference]]**---//Proceedings of The 30th Chinese Control Conference (CCC)//, pp. 6593-6598, 2011. {{files download="Pipeline.pdf" text="PDF"}}
~-Yong Wang,Katsuhisa Horimoto, Luonan Chen. ---**[[http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6001633&tag=1 An Integrated Pipeline for Gene Regulatory Network Inference]]**---//Proceedings of The 30th Chinese Control Conference (CCC)//, pp. 6593-6598, 2011. {{files download="Pipeline.pdf" text="PDF"}}
Deletions:
~-Yong Wang},Katsuhisa Horimoto, Luonan Chen. ---**[[http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6001633&tag=1 An Integrated Pipeline for Gene Regulatory Network Inference]]**---//Proceedings of The 30th Chinese Control Conference (CCC)//, pp. 6593-6598, 2011. {{files download="Pipeline.pdf" text="PDF"}}
Additions:
~- Duren Zhana, Yong Wang, Shigeru Saito, Katsuhisa Horimoto. .--- ** [[Inferring Gene Regulatory Network for Cell Reprogramming]]. ]]**---//Proceedings of The 31th Chinese Control Conference (CCC)//, pp. 7437-7442, 2012. {{files download="GRNiPSCCCC2012.pdf" text="PDF"}}
~- Yong Wang, Qiao-Feng Wu, Chen Chen, Ling-Yun Wu, Xian-Zhong Yan, Shu-Guang Yu, Xiang-Sun Zhang, and Fan-Rong Liang.--- ** [[http://www.biomedcentral.com/1752-0509/6/S1/S15/abstract Revealing metabolite biomarkers for acupuncture treatment by linear programming based feature selection]]**---//BMC Systems Biology//, 6(Suppl 1):S15, 2012.
~-Yong Wang},Katsuhisa Horimoto, Luonan Chen. ---**[[http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6001633&tag=1 An Integrated Pipeline for Gene Regulatory Network Inference]]**---//Proceedings of The 30th Chinese Control Conference (CCC)//, pp. 6593-6598, 2011. {{files download="Pipeline.pdf" text="PDF"}}
~- Yong Wang, Qiao-Feng Wu, Chen Chen, Ling-Yun Wu, Xian-Zhong Yan, Shu-Guang Yu, Xiang-Sun Zhang, and Fan-Rong Liang.--- ** [[http://www.biomedcentral.com/1752-0509/6/S1/S15/abstract Revealing metabolite biomarkers for acupuncture treatment by linear programming based feature selection]]**---//BMC Systems Biology//, 6(Suppl 1):S15, 2012.
~-Yong Wang},Katsuhisa Horimoto, Luonan Chen. ---**[[http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6001633&tag=1 An Integrated Pipeline for Gene Regulatory Network Inference]]**---//Proceedings of The 30th Chinese Control Conference (CCC)//, pp. 6593-6598, 2011. {{files download="Pipeline.pdf" text="PDF"}}
Deletions:
~-Yong Wang},Katsuhisa Horimoto, Luonan Chen. ---**[[An Integrated Pipeline for Gene Regulatory Network Inference]]**---//Proceedings of The 30th Chinese Control Conference (CCC)//, pp. 6593-6598, 2011. {{files download="Pipeline.pdf" text="PDF"}}
Additions:
~-Yong Wang},Katsuhisa Horimoto, Luonan Chen. ---**[[An Integrated Pipeline for Gene Regulatory Network Inference]]**---//Proceedings of The 30th Chinese Control Conference (CCC)//, pp. 6593-6598, 2011. {{files download="Pipeline.pdf" text="PDF"}}
Additions:
=== Selected Publications===
~- Yong Wang, Qiao-Feng Wu, Chen Chen, Ling-Yun Wu, Xian-Zhong Yan, Shu-Guang Yu, Xiang-Sun Zhang, and Fan-Rong Liang.---**[[http://www.biomedcentral.com/1752-0509/6/S1/S15/abstract Revealing metabolite biomarkers for acupuncture treatment by linear programming based feature selection]]**---//BMC Systems Biology//, 6(Suppl 1):S15, 2012.
~- Xianwen Ren, Yong Wang, Jiguang Wang and Xiang-Sun Zhang. ---**[[http://www.biomedcentral.com/1471-2105/13/70 A unified computational model for revealing and predicting subtle subtypes of cancers]]**---//BMC Bioinformatics//, 13:70, 2012.
~- Ji-Guang Wang, Qiang Huang, Zhi-Ping Liu, Yong Wang, Ling-Yun Wu, Xiang-Sun Zhang, and Luonan Chen. ---**[[http://nar.oxfordjournals.org/content/early/2011/05/04/nar.gkr251 NOA: a novel network ontology analysis method]]**---//Nucleic Acids Research//, 39(13):e87, 2011.
~- Yong Wang and Yu Xia,--- ** [[http://www.aporc.org/LNOR/9/OSB2008F42.pdf Condition specific subnetwork identification using an optimization model]].**--- //Lecture Notes in Operations Research//, 9, pp. 329--336, 2008.
~- Yong Wang, Qiao-Feng Wu, Chen Chen, Ling-Yun Wu, Xian-Zhong Yan, Shu-Guang Yu, Xiang-Sun Zhang, and Fan-Rong Liang.---**[[http://www.biomedcentral.com/1752-0509/6/S1/S15/abstract Revealing metabolite biomarkers for acupuncture treatment by linear programming based feature selection]]**---//BMC Systems Biology//, 6(Suppl 1):S15, 2012.
~- Xianwen Ren, Yong Wang, Jiguang Wang and Xiang-Sun Zhang. ---**[[http://www.biomedcentral.com/1471-2105/13/70 A unified computational model for revealing and predicting subtle subtypes of cancers]]**---//BMC Bioinformatics//, 13:70, 2012.
~- Ji-Guang Wang, Qiang Huang, Zhi-Ping Liu, Yong Wang, Ling-Yun Wu, Xiang-Sun Zhang, and Luonan Chen. ---**[[http://nar.oxfordjournals.org/content/early/2011/05/04/nar.gkr251 NOA: a novel network ontology analysis method]]**---//Nucleic Acids Research//, 39(13):e87, 2011.
~- Yong Wang and Yu Xia,--- ** [[http://www.aporc.org/LNOR/9/OSB2008F42.pdf Condition specific subnetwork identification using an optimization model]].**--- //Lecture Notes in Operations Research//, 9, pp. 329--336, 2008.
Deletions:
Additions:
=== Softwares ===
~- [[http://doc.aporc.org/wiki/GRNInfer GRNInfer: Gene Regulatory Network Inference by Integrating Multiple Datasets ]]
~- [[http://doc.aporc.org/wiki/GNTInfer GNTInfer Gene Regulatory Network and Drug Target Inference]]
~- [[http://doc.aporc.org/wiki/MDCInfer MDCInfer: Protein-Protein Interaction Prediction by Linear Programming]]
~- [[http://doc.aporc.org/wiki/MNAligner MNAligner: Network Alignment by Quadratic Programming]]
~- [[http://doc.aporc.org/wiki/Samo SAMO: Structure Alignment by Multi-objective Optimization model]]
~- [[http://app.aporc.org/NOA/ NOA: Network Ontology Analysis tool]]
~- [[http://doc.aporc.org/wiki/GRNInfer GRNInfer: Gene Regulatory Network Inference by Integrating Multiple Datasets ]]
~- [[http://doc.aporc.org/wiki/GNTInfer GNTInfer Gene Regulatory Network and Drug Target Inference]]
~- [[http://doc.aporc.org/wiki/MDCInfer MDCInfer: Protein-Protein Interaction Prediction by Linear Programming]]
~- [[http://doc.aporc.org/wiki/MNAligner MNAligner: Network Alignment by Quadratic Programming]]
~- [[http://doc.aporc.org/wiki/Samo SAMO: Structure Alignment by Multi-objective Optimization model]]
~- [[http://app.aporc.org/NOA/ NOA: Network Ontology Analysis tool]]
Additions:
~- [[http://scholar.google.com/citations?hl=en&user=M0fnh30AAAAJ My Citation in Google]]
Additions:
~- {{files download="YongWangVitaeChinese2011.pdf" text="科研简历 (PDF)"}}
~- {{files download="YongWangVitae2011.pdf" text="Curriculum Vitae (PDF)"}}
~- {{files download="YongWangVitae2011.pdf" text="Curriculum Vitae (PDF)"}}
Deletions:
~- {{files download="Yong Wang Vitae2011.pdf" text="Curriculum Vitae (PDF)"}}
Additions:
~- {{files download="Yong Wang Vitae Chinese2011.pdf" text="科研简历 (PDF)"}}
~- {{files download="Yong Wang Vitae2011.pdf" text="Curriculum Vitae (PDF)"}}
~- {{files download="Yong Wang Vitae2011.pdf" text="Curriculum Vitae (PDF)"}}
Deletions:
~- {{files download="Yong Wang Vitae.pdf" text="Curriculum Vitae (PDF)"}}
Additions:
~- Complex network
Additions:
~- [[http://www.ncbi.nlm.nih.gov/pubmed/ PubMed]]
Deletions:
Additions:
~- [[http://people.gucas.ac.cn/~yongwang My Homepage in GUCAS]]
Deletions:
特别研究员, [[http://www.cbrc.jp/index.eng.html 计算生物学研究中心]], [[http://www.aist.go.jp/index_en.html 日本产业技术综合研究所]]
Additions:
Associate professor of [[http://www.amt.ac.cn Institute of Applied Mathematics]], [[http://www.amss.ac.cn Academy of Mathematics and Systems Science]], [[http://www.cas.ac.cn Chinese Academy of Sciences]]
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]], [[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST)]]
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]], [[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST)]]
Deletions:
[[http://www.amss.ac.cn Academy of Mathematics and Systems Science]], [[http://www.cas.ac.cn Chinese Academy of Sciences]]
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]],
[[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST)]]
Additions:
Associate professor of [[http://www.amt.ac.cn Institute of Applied Mathematics]],
[[http://www.amss.ac.cn Academy of Mathematics and Systems Science]], [[http://www.cas.ac.cn Chinese Academy of Sciences]]
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]],
[[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST)]]
[[http://www.amss.ac.cn Academy of Mathematics and Systems Science]], [[http://www.cas.ac.cn Chinese Academy of Sciences]]
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]],
[[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST)]]
Deletions:
[[http://www.amss.ac.cn Academy of Mathematics and Systems Science]], [[http://www.cas.ac.cn Chinese Academy of Sciences]] **
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]], **
[[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST), Japan]] **
Additions:
Associate professor of [[http://www.amt.ac.cn Institute of Applied Mathematics]], **
[[http://www.amss.ac.cn Academy of Mathematics and Systems Science]], [[http://www.cas.ac.cn Chinese Academy of Sciences]] **
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]], **
[[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST), Japan]] **
[[http://www.amss.ac.cn Academy of Mathematics and Systems Science]], [[http://www.cas.ac.cn Chinese Academy of Sciences]] **
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]], **
[[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST), Japan]] **
Deletions:
[[http://www.amss.ac.cn Academy of Mathematics and Systems Science]], [[http://www.cas.ac.cn Chinese Academy of Sciences]] --- **
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]], --- **
[[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST), Japan]]--- **
Additions:
Associate professor of [[http://www.amt.ac.cn Institute of Applied Mathematics]], --- **
[[http://www.amss.ac.cn Academy of Mathematics and Systems Science]], [[http://www.cas.ac.cn Chinese Academy of Sciences]] --- **
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]], --- **
[[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST), Japan]]--- **
[[http://www.amss.ac.cn Academy of Mathematics and Systems Science]], [[http://www.cas.ac.cn Chinese Academy of Sciences]] --- **
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]], --- **
[[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST), Japan]]--- **
Deletions:
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]], [[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST), Japan]]
Additions:
副研究员, [[http://www.amt.ac.cn 应用数学研究所]], [[http://www.amss.ac.cn 数学与系统科学研究院]], [[http://www.cas.ac.cn 中国科学院]]
Deletions:
Additions:
Associate professor of [[http://www.amt.ac.cn Institute of Applied Mathematics]], [[http://www.amss.ac.cn Academy of Mathematics and Systems Science]]
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]], [[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST), Japan]]
Researcher of [[http://www.cbrc.jp/index.eng.html Computational Biology Research Center (CBRC)]], [[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST), Japan]]
Deletions:
Research staff of [[http://www.cbrc.jp/index.eng.html The Computational Biology Research Center (CBRC)]], [[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST), Japan]]
Additions:
""<img src="images/users/YongReasearchSummary.jpg" style="float: right; margin: 1.0%; padding: 0.5%;">""
Deletions:
Additions:
""<img src="images/users/YongReasearchSummary.jpg" >""
Deletions:
No Differences
Additions:
""<img src="images/users/YongReasearchSummary.jpg" style="float: left; margin: 1.0%; padding: 0.5%;">""
Deletions:
Additions:
""<img src="images/users/YongResearchSummary.jpg" style="float: left; margin: 1.0%; padding: 0.5%;">""
Deletions:
Additions:
""<img src="images/users/YongResearchSummary.jpg" style="float: right; margin: 1.0%; padding: 0.5%;">""
Deletions:
{{image url="./ResearchSummary.jpg" title="" alt=""}}
::c::----
Additions:
{{image url="./ResearchSummary.jpg" title="" alt=""}}
Deletions:
Additions:
{{image url="ResearchSummary.jpg" title="" alt=""}}
Additions:
""<img src="ResearchSummary.jpg" style="float: right; margin: 1.0%; padding: 0.5%;">""
Deletions:
No Differences
Additions:
""<img src="images/users/ResearchSummary.jpg" style="float: right; margin: 1.0%; padding: 0.5%;">""
Additions:
~- Yong Wang, Rui-Sheng Wang, Trupti Joshi, Dong Xu, Xiang-Sun Zhang, Luonan Chen, and Yu Xia. --- **[[http://www.igi-global.com/reference/details.asp?ID=34877&v=tableOfContents A Linear Programming Framework for Inferring Gene Regulatory Networks by Integrating Heterogeneous Data]],**--- Chapter XIX in Computational Methodologies in Gene Regulatory Networks, Sanjoy Das, Doina Caragea, W. H. Hsu, Stephen M. Welch (eds.), IGI Global, 2009. {{files download="CMGRN2009.pdf" text="PDF"}}
~- Yong Wang, Ling-Yun Wu, Ji-Hong Zhang, Zhong-Wei Zhan, Xiang-Sun Zhang, and Luonan Chen.--- **[[http://www.computer.org/portal/web/csdl/doi/10.1109/TCBB.2007.70250 Evaluating protein similarity from coarse structures]].**--- //IEEE/ACM Transactions on Computational Biology and Bioinformatics,// Vol. 6, No. 4, pp. 583-593, 2009. {{files download="TCBB2009.pdf" text="PDF"}}
~- Yong Wang, Xiang-Sun Zhang, and Yu Xia.--- ** [[http://nar.oxfordjournals.org/cgi/content/full/gkp625?ijkey=SRGbC88ZbnbWPme&keytype=ref Predicting eukaryotic transcriptional cooperativity by Bayesian network integration of genome-wide data]].**--- //Nucleic Acids Research//, Vol. 37, No. 18, pp. 5943-5958, 2009. {{files download="NAR2009.pdf" text="PDF"}}
~- Yong Wang, Xiang-Sun Zhang, and Luonan Chen.--- ** [[http://www.liebertonline.com/doi/abs/10.1089/omi.2009.0040 A network biology study on circadian rhythm by integrating various omics data]].**--- //OMICS: A Journal of Integrative Biology,// Vol. 13, No. 4, 2009. {{files download="OMICS2009.pdf" text="PDF"}}
~- Rui-Sheng Wang, Yong Wang, Ling-Yun Wu, Xiang-Sun Zhang, Luonan Chen.--- **[[http://www.biomedcentral.com/1471-2105/8/391/abstract Analysis on multi-domain cooperation for predicting protein-protein interactions]].**--- //BMC Bioinformatics//, 8:391, 2007. {{files download="BMCBioinfo2007.pdf" text="PDF"}}
~- Rui-Sheng Wang, Yong Wang, Xiang-Sun Zhang, Luonan Chen.--- **[[http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btm465v1 Inferring transcriptional regulatory networks from high-throughput data]].**--- //Bioinformatics//, Vol. 23, pp. 3056-3064, 2007. {{files download="Bioinformatics2007.pdf" text="PDF"}}
~- Yong Wang, Trupti Joshi, Xiang-Sun. Zhang, Dong Xu and Luonan Chen.--- **[[http://www.springerlink.com/content/?k=Inference+of+Gene+Regulatory+Networks+by+Linear+Programming Supervised Inference of Gene Regulatory Networks by Linear Programming]].**--- Lecture Notes in Bioinformatics, Vol. 4115, pp. 551-561, 2006. {{files download="LNBI2006.pdf" text="PDF"}}
~- Yong Wang, Trupti Joshi, Xiang-Sun Zhang, Dong Xu, and Luonan Chen.--- **[[http://bioinformatics.oxfordjournals.org/cgi/content/abstract/22/19/2413 Inferring gene regulatory networks from multiple microarray datasets]].**--- //Bioinformatics//, 22(19):2413-2420, 2006. {{files download="Bioinformatics2006.pdf" text="PDF"}}
~- Xiang-Sun Zhang, Yong Wang, Zhong-Wei Zhan, Ling-Yun Wu, and Luonan Chen. --- **[[http://www.worldscinet.com/jbcb/03/0302/S0219720005001107.html Exploring protein's optimal HP configurations by self-organizing mapping]].**--- //Journal of Bioinformatics and Computational Biology//, Vol. 3, No. 2, pp. 385-400, 2005. {{files download="JBCB2005.pdf" text="PDF"}}
~- Yong Wang, Ling-Yun Wu, Ji-Hong Zhang, Zhong-Wei Zhan, Xiang-Sun Zhang, and Luonan Chen.--- **[[http://www.computer.org/portal/web/csdl/doi/10.1109/TCBB.2007.70250 Evaluating protein similarity from coarse structures]].**--- //IEEE/ACM Transactions on Computational Biology and Bioinformatics,// Vol. 6, No. 4, pp. 583-593, 2009. {{files download="TCBB2009.pdf" text="PDF"}}
~- Yong Wang, Xiang-Sun Zhang, and Yu Xia.--- ** [[http://nar.oxfordjournals.org/cgi/content/full/gkp625?ijkey=SRGbC88ZbnbWPme&keytype=ref Predicting eukaryotic transcriptional cooperativity by Bayesian network integration of genome-wide data]].**--- //Nucleic Acids Research//, Vol. 37, No. 18, pp. 5943-5958, 2009. {{files download="NAR2009.pdf" text="PDF"}}
~- Yong Wang, Xiang-Sun Zhang, and Luonan Chen.--- ** [[http://www.liebertonline.com/doi/abs/10.1089/omi.2009.0040 A network biology study on circadian rhythm by integrating various omics data]].**--- //OMICS: A Journal of Integrative Biology,// Vol. 13, No. 4, 2009. {{files download="OMICS2009.pdf" text="PDF"}}
~- Rui-Sheng Wang, Yong Wang, Ling-Yun Wu, Xiang-Sun Zhang, Luonan Chen.--- **[[http://www.biomedcentral.com/1471-2105/8/391/abstract Analysis on multi-domain cooperation for predicting protein-protein interactions]].**--- //BMC Bioinformatics//, 8:391, 2007. {{files download="BMCBioinfo2007.pdf" text="PDF"}}
~- Rui-Sheng Wang, Yong Wang, Xiang-Sun Zhang, Luonan Chen.--- **[[http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btm465v1 Inferring transcriptional regulatory networks from high-throughput data]].**--- //Bioinformatics//, Vol. 23, pp. 3056-3064, 2007. {{files download="Bioinformatics2007.pdf" text="PDF"}}
~- Yong Wang, Trupti Joshi, Xiang-Sun. Zhang, Dong Xu and Luonan Chen.--- **[[http://www.springerlink.com/content/?k=Inference+of+Gene+Regulatory+Networks+by+Linear+Programming Supervised Inference of Gene Regulatory Networks by Linear Programming]].**--- Lecture Notes in Bioinformatics, Vol. 4115, pp. 551-561, 2006. {{files download="LNBI2006.pdf" text="PDF"}}
~- Yong Wang, Trupti Joshi, Xiang-Sun Zhang, Dong Xu, and Luonan Chen.--- **[[http://bioinformatics.oxfordjournals.org/cgi/content/abstract/22/19/2413 Inferring gene regulatory networks from multiple microarray datasets]].**--- //Bioinformatics//, 22(19):2413-2420, 2006. {{files download="Bioinformatics2006.pdf" text="PDF"}}
~- Xiang-Sun Zhang, Yong Wang, Zhong-Wei Zhan, Ling-Yun Wu, and Luonan Chen. --- **[[http://www.worldscinet.com/jbcb/03/0302/S0219720005001107.html Exploring protein's optimal HP configurations by self-organizing mapping]].**--- //Journal of Bioinformatics and Computational Biology//, Vol. 3, No. 2, pp. 385-400, 2005. {{files download="JBCB2005.pdf" text="PDF"}}
Deletions:
~- Yong Wang, Ling-Yun Wu, Ji-Hong Zhang, Zhong-Wei Zhan, Xiang-Sun Zhang, and Luonan Chen.--- **[[http://www.computer.org/portal/web/csdl/doi/10.1109/TCBB.2007.70250 Evaluating protein similarity from coarse structures]].**--- //IEEE/ACM Transactions on Computational Biology and Bioinformatics,// Vol. 6, No. 4, pp. 583-593, 2009. [[http://zhangroup.aporc.org/images/files/TCBB2009.pdf PDF]]
~- Yong Wang, Xiang-Sun Zhang, and Yu Xia.--- ** [[http://nar.oxfordjournals.org/cgi/content/full/gkp625?ijkey=SRGbC88ZbnbWPme&keytype=ref Predicting eukaryotic transcriptional cooperativity by Bayesian network integration of genome-wide data]].**--- //Nucleic Acids Research//, Vol. 37, No. 18, pp. 5943-5958, 2009. [[http://zhangroup.aporc.org/images/files/NAR2009.pdf PDF]]
~- Yong Wang, Xiang-Sun Zhang, and Luonan Chen.--- ** [[http://www.liebertonline.com/doi/abs/10.1089/omi.2009.0040 A network biology study on circadian rhythm by integrating various omics data]].**--- //OMICS: A Journal of Integrative Biology,// Vol. 13, No. 4, 2009. [[http://zhangroup.aporc.org/images/files/OMICS2009.pdf PDF]]
~- Rui-Sheng Wang, Yong Wang, Ling-Yun Wu, Xiang-Sun Zhang, Luonan Chen.--- **[[http://www.biomedcentral.com/1471-2105/8/391/abstract Analysis on multi-domain cooperation for predicting protein-protein interactions]].**--- //BMC Bioinformatics//, 8:391, 2007. [[http://zhangroup.aporc.org/images/files/BMCBioinfo2007.pdf PDF]]
~- Rui-Sheng Wang, Yong Wang, Xiang-Sun Zhang, Luonan Chen.--- **[[http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btm465v1 Inferring transcriptional regulatory networks from high-throughput data]].**--- //Bioinformatics//, Vol. 23, pp. 3056-3064, 2007. [[http://zhangroup.aporc.org/images/files/Bioinformatics2007.pdf PDF]]
~- Yong Wang, Trupti Joshi, Xiang-Sun. Zhang, Dong Xu and Luonan Chen.--- **[[http://www.springerlink.com/content/?k=Inference+of+Gene+Regulatory+Networks+by+Linear+Programming Supervised Inference of Gene Regulatory Networks by Linear Programming]].**--- Lecture Notes in Bioinformatics, Vol. 4115, pp. 551-561, 2006. [[http://zhangroup.aporc.org/images/files/LNBI2006.pdf PDF]]
~- Yong Wang, Trupti Joshi, Xiang-Sun Zhang, Dong Xu, and Luonan Chen.--- **[[http://bioinformatics.oxfordjournals.org/cgi/content/abstract/22/19/2413 Inferring gene regulatory networks from multiple microarray datasets]].**--- //Bioinformatics//, 22(19):2413-2420, 2006. [[http://zhangroup.aporc.org/images/files/Bioinformatics2006.pdf PDF]]
~- Xiang-Sun Zhang, Yong Wang, Zhong-Wei Zhan, Ling-Yun Wu, and Luonan Chen. --- **[[http://www.worldscinet.com/jbcb/03/0302/S0219720005001107.html Exploring protein's optimal HP configurations by self-organizing mapping]].**--- //Journal of Bioinformatics and Computational Biology//, Vol. 3, No. 2, pp. 385-400, 2005. [[http://zhangroup.aporc.org/images/files/JBCB2005.pdf PDF]]
Additions:
~- Yong Wang, Eric Franzosa, Xiang-Sun Zhang, and Yu Xia. ---**[[http://nar.oxfordjournals.org/content/38/18/5959 Protein evolution in yeast transcription factor subnetworks]]**--- //Nucleic Acids Research//, 38(18): 5959–5969, 2010. {{files download="NAR2010.pdf" text="PDF"}}
Deletions:
Additions:
~- Yong Wang, Eric Franzosa, Xiang-Sun Zhang, and Yu Xia. ---**[[http://nar.oxfordjournals.org/content/38/18/5959 Protein evolution in yeast transcription factor subnetworks]]**--- //Nucleic Acids Research//, 38(18): 5959–5969, 2010. {{files download="NAR2010.pdf" text=PDF}}
Deletions:
Additions:
~- Yong Wang, Rui-Sheng Wang, Trupti Joshi, Dong Xu, Xiang-Sun Zhang, Luonan Chen, and Yu Xia. --- **[[http://www.igi-global.com/reference/details.asp?ID=34877&v=tableOfContents A Linear Programming Framework for Inferring Gene Regulatory Networks by Integrating Heterogeneous Data]],**--- Chapter XIX in Computational Methodologies in Gene Regulatory Networks, Sanjoy Das, Doina Caragea, W. H. Hsu, Stephen M. Welch (eds.), IGI Global, 2009. [[http://zhangroup.aporc.org/images/files/CMGRN2009.pdf PDF]]
~- Rui-Sheng Wang, Yong Wang, Xiang-Sun Zhang, Luonan Chen.--- **[[http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btm465v1 Inferring transcriptional regulatory networks from high-throughput data]].**--- //Bioinformatics//, Vol. 23, pp. 3056-3064, 2007. [[http://zhangroup.aporc.org/images/files/Bioinformatics2007.pdf PDF]]
~- Yong Wang, Trupti Joshi, Xiang-Sun. Zhang, Dong Xu and Luonan Chen.--- **[[http://www.springerlink.com/content/?k=Inference+of+Gene+Regulatory+Networks+by+Linear+Programming Supervised Inference of Gene Regulatory Networks by Linear Programming]].**--- Lecture Notes in Bioinformatics, Vol. 4115, pp. 551-561, 2006. [[http://zhangroup.aporc.org/images/files/LNBI2006.pdf PDF]]
~- Rui-Sheng Wang, Yong Wang, Xiang-Sun Zhang, Luonan Chen.--- **[[http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btm465v1 Inferring transcriptional regulatory networks from high-throughput data]].**--- //Bioinformatics//, Vol. 23, pp. 3056-3064, 2007. [[http://zhangroup.aporc.org/images/files/Bioinformatics2007.pdf PDF]]
~- Yong Wang, Trupti Joshi, Xiang-Sun. Zhang, Dong Xu and Luonan Chen.--- **[[http://www.springerlink.com/content/?k=Inference+of+Gene+Regulatory+Networks+by+Linear+Programming Supervised Inference of Gene Regulatory Networks by Linear Programming]].**--- Lecture Notes in Bioinformatics, Vol. 4115, pp. 551-561, 2006. [[http://zhangroup.aporc.org/images/files/LNBI2006.pdf PDF]]
Additions:
~- Rui-Sheng Wang, Yong Wang, Ling-Yun Wu, Xiang-Sun Zhang, Luonan Chen.--- **[[http://www.biomedcentral.com/1471-2105/8/391/abstract Analysis on multi-domain cooperation for predicting protein-protein interactions]].**--- //BMC Bioinformatics//, 8:391, 2007. [[http://zhangroup.aporc.org/images/files/BMCBioinfo2007.pdf PDF]]
~- Xiang-Sun Zhang, Yong Wang, Zhong-Wei Zhan, Ling-Yun Wu, and Luonan Chen. --- **[[http://www.worldscinet.com/jbcb/03/0302/S0219720005001107.html Exploring protein's optimal HP configurations by self-organizing mapping]].**--- //Journal of Bioinformatics and Computational Biology//, Vol. 3, No. 2, pp. 385-400, 2005. [[http://zhangroup.aporc.org/images/files/JBCB2005.pdf PDF]]
~- Xiang-Sun Zhang, Yong Wang, Zhong-Wei Zhan, Ling-Yun Wu, and Luonan Chen. --- **[[http://www.worldscinet.com/jbcb/03/0302/S0219720005001107.html Exploring protein's optimal HP configurations by self-organizing mapping]].**--- //Journal of Bioinformatics and Computational Biology//, Vol. 3, No. 2, pp. 385-400, 2005. [[http://zhangroup.aporc.org/images/files/JBCB2005.pdf PDF]]
Deletions:
~1) Xiang-Sun Zhang, Yong Wang, Zhong-Wei Zhan, Ling-Yun Wu, and Luonan Chen. --- **[[http://www.worldscinet.com/jbcb/03/0302/S0219720005001107.html Exploring protein's optimal HP configurations by self-organizing mapping]].**--- //Journal of Bioinformatics and Computational Biology//, Vol. 3, No. 2, pp. 385-400, 2005. [[http://zhangroup.aporc.org/images/files/JBCB2005.pdf PDF]]
Additions:
~- Yong Wang, Eric Franzosa, Xiang-Sun Zhang, and Yu Xia. ---**[[http://nar.oxfordjournals.org/content/38/18/5959 Protein evolution in yeast transcription factor subnetworks]]**--- //Nucleic Acids Research//, 38(18): 5959–5969, 2010. [[http://zhangroup.aporc.org/images/files/NAR2010.pdf PDF]]
~- Yong Wang, Xiang-Sun Zhang, and Yu Xia.--- ** [[http://nar.oxfordjournals.org/cgi/content/full/gkp625?ijkey=SRGbC88ZbnbWPme&keytype=ref Predicting eukaryotic transcriptional cooperativity by Bayesian network integration of genome-wide data]].**--- //Nucleic Acids Research//, Vol. 37, No. 18, pp. 5943-5958, 2009. [[http://zhangroup.aporc.org/images/files/NAR2009.pdf PDF]]
~- Yong Wang, Xiang-Sun Zhang, and Yu Xia.--- ** [[http://nar.oxfordjournals.org/cgi/content/full/gkp625?ijkey=SRGbC88ZbnbWPme&keytype=ref Predicting eukaryotic transcriptional cooperativity by Bayesian network integration of genome-wide data]].**--- //Nucleic Acids Research//, Vol. 37, No. 18, pp. 5943-5958, 2009. [[http://zhangroup.aporc.org/images/files/NAR2009.pdf PDF]]
Deletions:
~- Yong Wang, Xiang-Sun Zhang, and Yu Xia.--- ** [[http://nar.oxfordjournals.org/cgi/content/full/gkp625?ijkey=SRGbC88ZbnbWPme&keytype=ref Predicting eukaryotic transcriptional cooperativity by Bayesian network integration of genome-wide data]]. [[http://zhangroup.aporc.org/images/files/NAR2009.pdf PDF]]
Additions:
~- Yong Wang, Eric Franzosa, Xiang-Sun Zhang, and Yu Xia. ---**[[http://nar.oxfordjournals.org/content/38/18/5959 Protein evolution in yeast transcription factor subnetworks]]**--- [[http://zhangroup.aporc.org/images/files/NAR2010.pdf PDF]]
~- Yong Wang, Ling-Yun Wu, Ji-Hong Zhang, Zhong-Wei Zhan, Xiang-Sun Zhang, and Luonan Chen.--- **[[http://www.computer.org/portal/web/csdl/doi/10.1109/TCBB.2007.70250 Evaluating protein similarity from coarse structures]].**--- //IEEE/ACM Transactions on Computational Biology and Bioinformatics,// Vol. 6, No. 4, pp. 583-593, 2009. [[http://zhangroup.aporc.org/images/files/TCBB2009.pdf PDF]]
~- Yong Wang, Xiang-Sun Zhang, and Yu Xia.--- ** [[http://nar.oxfordjournals.org/cgi/content/full/gkp625?ijkey=SRGbC88ZbnbWPme&keytype=ref Predicting eukaryotic transcriptional cooperativity by Bayesian network integration of genome-wide data]]. [[http://zhangroup.aporc.org/images/files/NAR2009.pdf PDF]]
~- Yong Wang, Xiang-Sun Zhang, and Luonan Chen.--- ** [[http://www.liebertonline.com/doi/abs/10.1089/omi.2009.0040 A network biology study on circadian rhythm by integrating various omics data]].**--- //OMICS: A Journal of Integrative Biology,// Vol. 13, No. 4, 2009. [[http://zhangroup.aporc.org/images/files/OMICS2009.pdf PDF]]
~1) Rui-Sheng Wang, Yong Wang, Ling-Yun Wu, Xiang-Sun Zhang, Luonan Chen.--- **[[http://www.biomedcentral.com/1471-2105/8/391/abstract Analysis on multi-domain cooperation for predicting protein-protein interactions]].**--- //BMC Bioinformatics//, 8:391, 2007. [[http://zhangroup.aporc.org/images/files/BMCBioinfo2007.pdf PDF]]
~- Yong Wang, Trupti Joshi, Xiang-Sun Zhang, Dong Xu, and Luonan Chen.--- **[[http://bioinformatics.oxfordjournals.org/cgi/content/abstract/22/19/2413 Inferring gene regulatory networks from multiple microarray datasets]].**--- //Bioinformatics//, 22(19):2413-2420, 2006. [[http://zhangroup.aporc.org/images/files/Bioinformatics2006.pdf PDF]]
~1) Xiang-Sun Zhang, Yong Wang, Zhong-Wei Zhan, Ling-Yun Wu, and Luonan Chen. --- **[[http://www.worldscinet.com/jbcb/03/0302/S0219720005001107.html Exploring protein's optimal HP configurations by self-organizing mapping]].**--- //Journal of Bioinformatics and Computational Biology//, Vol. 3, No. 2, pp. 385-400, 2005. [[http://zhangroup.aporc.org/images/files/JBCB2005.pdf PDF]]
~- Yong Wang, Ling-Yun Wu, Ji-Hong Zhang, Zhong-Wei Zhan, Xiang-Sun Zhang, and Luonan Chen.--- **[[http://www.computer.org/portal/web/csdl/doi/10.1109/TCBB.2007.70250 Evaluating protein similarity from coarse structures]].**--- //IEEE/ACM Transactions on Computational Biology and Bioinformatics,// Vol. 6, No. 4, pp. 583-593, 2009. [[http://zhangroup.aporc.org/images/files/TCBB2009.pdf PDF]]
~- Yong Wang, Xiang-Sun Zhang, and Yu Xia.--- ** [[http://nar.oxfordjournals.org/cgi/content/full/gkp625?ijkey=SRGbC88ZbnbWPme&keytype=ref Predicting eukaryotic transcriptional cooperativity by Bayesian network integration of genome-wide data]]. [[http://zhangroup.aporc.org/images/files/NAR2009.pdf PDF]]
~- Yong Wang, Xiang-Sun Zhang, and Luonan Chen.--- ** [[http://www.liebertonline.com/doi/abs/10.1089/omi.2009.0040 A network biology study on circadian rhythm by integrating various omics data]].**--- //OMICS: A Journal of Integrative Biology,// Vol. 13, No. 4, 2009. [[http://zhangroup.aporc.org/images/files/OMICS2009.pdf PDF]]
~1) Rui-Sheng Wang, Yong Wang, Ling-Yun Wu, Xiang-Sun Zhang, Luonan Chen.--- **[[http://www.biomedcentral.com/1471-2105/8/391/abstract Analysis on multi-domain cooperation for predicting protein-protein interactions]].**--- //BMC Bioinformatics//, 8:391, 2007. [[http://zhangroup.aporc.org/images/files/BMCBioinfo2007.pdf PDF]]
~- Yong Wang, Trupti Joshi, Xiang-Sun Zhang, Dong Xu, and Luonan Chen.--- **[[http://bioinformatics.oxfordjournals.org/cgi/content/abstract/22/19/2413 Inferring gene regulatory networks from multiple microarray datasets]].**--- //Bioinformatics//, 22(19):2413-2420, 2006. [[http://zhangroup.aporc.org/images/files/Bioinformatics2006.pdf PDF]]
~1) Xiang-Sun Zhang, Yong Wang, Zhong-Wei Zhan, Ling-Yun Wu, and Luonan Chen. --- **[[http://www.worldscinet.com/jbcb/03/0302/S0219720005001107.html Exploring protein's optimal HP configurations by self-organizing mapping]].**--- //Journal of Bioinformatics and Computational Biology//, Vol. 3, No. 2, pp. 385-400, 2005. [[http://zhangroup.aporc.org/images/files/JBCB2005.pdf PDF]]
Deletions:
~- Zhi-Ping Liu, Yong Wang, Xiang-Sun Zhang and Luonan Chen. ---**Identifying dysfunctional crosstalk of pathways in various regions of Alzheimer's disease brains.**--- //BMC Systems Biology//, 4(Suppl 2):S11, 2010. ---[[http://www.biomedcentral.com/1752-0509/4/S2/S11/abstract Abstract]] | [[http://www.biomedcentral.com/1752-0509/4/S2/S11/ Read the paper]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang, and Luonan Chen. ---**Prediction of protein-RNA binding sites by a random forest method with combined features.**--- //Bioinformatics//, 26(13):1616-1622, 2010. ---[[http://www.ncbi.nlm.nih.gov/pubmed/20483814 Abstract]] | [[http://bioinformatics.oxfordjournals.org/cgi/content/abstract/26/13/1616 Read the paper]] | [[http://www.aporc.org/doc/wiki/PRNA Software and Webpage]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang and Luonan Chen.--- **Bridging protein local structures and protein functions.**--- //Amino Acids//, 35(3): 627-650, 2008. ---[[http://www.ncbi.nlm.nih.gov/pubmed/18421562 Abstract]] | [[http://www.springerlink.com/content/7629t35314811l89/ Read the paper]] | [[http://zhangroup.aporc.org/images/files/aminoacidweb.pdf PDF]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang, and Luonan Chen.---**Protein cavity clustering based on community structure of pocket similarity network.**--- //International Journal of Bioinformatics Research and Applications//, Vol. 4, No. 4, pp.445–460, 2008. ---[[http://www.ncbi.nlm.nih.gov/pubmed/19008186 Abstract]] | [[http://www.inderscience.com/search/index.php?action=record&rec_id=21179&prevQuery=&ps=10&m=or Read the paper ]] | [[http://zhangroup.aporc.org/images/files/IJBRAweb.pdf PDF]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang and Luonan Chen.--- **Analysis of protein surface patterns by pocket similarity network.**--- //Protein and Peptide Letters//, 15:448-455, 2008. --- [[http://www.ncbi.nlm.nih.gov/pubmed/18537733 Abstract]] | [[http://www.bentham.org/ppl/contabs/ppl15-5.htm Read the paper ]] | [[http://zhangroup.aporc.org/images/files/pplweb.pdf PDF]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Luonan Chen and Xiang-Sun Zhang.---**Predicting Gene Ontology functions from protein's regional surface structures.**--- //BMC Bioinformatics//, 8:475, 2007. ---[[http://www.ncbi.nlm.nih.gov/pubmed/18070366 Abstract]] | [[http://www.biomedcentral.com/1471-2105/8/475/abstract Read the paper ]]| [[http://www.aporc.org/doc/wiki/PSN Software and Webpage]]
Additions:
~- Full list of paper can be found [[http://zhangroup.aporc.org/YongWang/files.xml?action=download&file=Yong+Wang+Vitae.pdf Here]]. Papers in bioinformatics and systems biology can be found in [[http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=DetailsSearch&term=Yong+Wang+Academy+of+Mathematics+and+Systems+Science PubMed]]
Deletions:
Additions:
~- Full list of paper can be found [[http://zhangroup.aporc.org/YongWang/files.xml?action=download&file=Yong+Wang+Vitae.pdf Here]]. Papers in bioinformatics and systems biology can be found in [[http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=DetailsSearch&term=Yong+Wang PubMed]]
Deletions:
Additions:
~- Full list of paper can be found [[http://zhangroup.aporc.org/YongWang/files.xml?action=download&file=Yong+Wang+Vitae.pdf Here]]. Papers in bioinformatics and systems biology can be found in [[http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=DetailsSearch&term=(Yong,+Wang[Full Author Name]+OR+Wang,+Yong[Full+Author Name])+AND+Academy+of Mathematics and Systems Science[Affiliation] PubMed]]
Deletions:
Additions:
~- Full list of paper can be found [[http://zhangroup.aporc.org/YongWang/files.xml?action=download&file=Yong+Wang+Vitae.pdf Here]]. Papers in bioinformatics and systems biology can be found in [[http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=DetailsSearch&term=(Yong, Wang[Full Author Name] OR Wang, Yong[Full Author Name]) AND Academy of Mathematics and Systems Science[Affiliation] PubMed]]
Deletions:
Additions:
=== Selected Publications===
~- Yue-Feng Shen, Bo Li, Zhi-Ping Liu. ---**Protein structure alignment based on internal coordinates.**---//Interdisciplinary Sciences//, 2(4):308-319, 2010. ---[[http://www.ncbi.nlm.nih.gov/pubmed/21153777 Abstract]] | [[http://www.springerlink.com/content/x58q42246g76/ Read the paper]] | [[http://www.aporc.org/doc/wiki/SABIC Software and Webpage]] | [[http://zhangroup.aporc.org/images/files/sabicweb.pdf PDF]]
~- Zhi-Ping Liu, Yong Wang, Xiang-Sun Zhang and Luonan Chen. ---**Identifying dysfunctional crosstalk of pathways in various regions of Alzheimer's disease brains.**--- //BMC Systems Biology//, 4(Suppl 2):S11, 2010. ---[[http://www.biomedcentral.com/1752-0509/4/S2/S11/abstract Abstract]] | [[http://www.biomedcentral.com/1752-0509/4/S2/S11/ Read the paper]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang, and Luonan Chen. ---**Prediction of protein-RNA binding sites by a random forest method with combined features.**--- //Bioinformatics//, 26(13):1616-1622, 2010. ---[[http://www.ncbi.nlm.nih.gov/pubmed/20483814 Abstract]] | [[http://bioinformatics.oxfordjournals.org/cgi/content/abstract/26/13/1616 Read the paper]] | [[http://www.aporc.org/doc/wiki/PRNA Software and Webpage]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang and Luonan Chen.--- **Bridging protein local structures and protein functions.**--- //Amino Acids//, 35(3): 627-650, 2008. ---[[http://www.ncbi.nlm.nih.gov/pubmed/18421562 Abstract]] | [[http://www.springerlink.com/content/7629t35314811l89/ Read the paper]] | [[http://zhangroup.aporc.org/images/files/aminoacidweb.pdf PDF]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang, and Luonan Chen.---**Protein cavity clustering based on community structure of pocket similarity network.**--- //International Journal of Bioinformatics Research and Applications//, Vol. 4, No. 4, pp.445–460, 2008. ---[[http://www.ncbi.nlm.nih.gov/pubmed/19008186 Abstract]] | [[http://www.inderscience.com/search/index.php?action=record&rec_id=21179&prevQuery=&ps=10&m=or Read the paper ]] | [[http://zhangroup.aporc.org/images/files/IJBRAweb.pdf PDF]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang and Luonan Chen.--- **Analysis of protein surface patterns by pocket similarity network.**--- //Protein and Peptide Letters//, 15:448-455, 2008. --- [[http://www.ncbi.nlm.nih.gov/pubmed/18537733 Abstract]] | [[http://www.bentham.org/ppl/contabs/ppl15-5.htm Read the paper ]] | [[http://zhangroup.aporc.org/images/files/pplweb.pdf PDF]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Luonan Chen and Xiang-Sun Zhang.---**Predicting Gene Ontology functions from protein's regional surface structures.**--- //BMC Bioinformatics//, 8:475, 2007. ---[[http://www.ncbi.nlm.nih.gov/pubmed/18070366 Abstract]] | [[http://www.biomedcentral.com/1471-2105/8/475/abstract Read the paper ]]| [[http://www.aporc.org/doc/wiki/PSN Software and Webpage]]
~- Full list of paper can be found [[http://zhangroup.aporc.org/YongWang/files.xml?action=download&file=Yong+Wang+Vitae.pdf Here]]. Papers in bioinformatics and systems biology can be found in [[http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=DetailsSearch&term=Wang+Yong PubMed]]
::c::----
~- Yue-Feng Shen, Bo Li, Zhi-Ping Liu. ---**Protein structure alignment based on internal coordinates.**---//Interdisciplinary Sciences//, 2(4):308-319, 2010. ---[[http://www.ncbi.nlm.nih.gov/pubmed/21153777 Abstract]] | [[http://www.springerlink.com/content/x58q42246g76/ Read the paper]] | [[http://www.aporc.org/doc/wiki/SABIC Software and Webpage]] | [[http://zhangroup.aporc.org/images/files/sabicweb.pdf PDF]]
~- Zhi-Ping Liu, Yong Wang, Xiang-Sun Zhang and Luonan Chen. ---**Identifying dysfunctional crosstalk of pathways in various regions of Alzheimer's disease brains.**--- //BMC Systems Biology//, 4(Suppl 2):S11, 2010. ---[[http://www.biomedcentral.com/1752-0509/4/S2/S11/abstract Abstract]] | [[http://www.biomedcentral.com/1752-0509/4/S2/S11/ Read the paper]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang, and Luonan Chen. ---**Prediction of protein-RNA binding sites by a random forest method with combined features.**--- //Bioinformatics//, 26(13):1616-1622, 2010. ---[[http://www.ncbi.nlm.nih.gov/pubmed/20483814 Abstract]] | [[http://bioinformatics.oxfordjournals.org/cgi/content/abstract/26/13/1616 Read the paper]] | [[http://www.aporc.org/doc/wiki/PRNA Software and Webpage]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang and Luonan Chen.--- **Bridging protein local structures and protein functions.**--- //Amino Acids//, 35(3): 627-650, 2008. ---[[http://www.ncbi.nlm.nih.gov/pubmed/18421562 Abstract]] | [[http://www.springerlink.com/content/7629t35314811l89/ Read the paper]] | [[http://zhangroup.aporc.org/images/files/aminoacidweb.pdf PDF]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang, and Luonan Chen.---**Protein cavity clustering based on community structure of pocket similarity network.**--- //International Journal of Bioinformatics Research and Applications//, Vol. 4, No. 4, pp.445–460, 2008. ---[[http://www.ncbi.nlm.nih.gov/pubmed/19008186 Abstract]] | [[http://www.inderscience.com/search/index.php?action=record&rec_id=21179&prevQuery=&ps=10&m=or Read the paper ]] | [[http://zhangroup.aporc.org/images/files/IJBRAweb.pdf PDF]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang and Luonan Chen.--- **Analysis of protein surface patterns by pocket similarity network.**--- //Protein and Peptide Letters//, 15:448-455, 2008. --- [[http://www.ncbi.nlm.nih.gov/pubmed/18537733 Abstract]] | [[http://www.bentham.org/ppl/contabs/ppl15-5.htm Read the paper ]] | [[http://zhangroup.aporc.org/images/files/pplweb.pdf PDF]]
~- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Luonan Chen and Xiang-Sun Zhang.---**Predicting Gene Ontology functions from protein's regional surface structures.**--- //BMC Bioinformatics//, 8:475, 2007. ---[[http://www.ncbi.nlm.nih.gov/pubmed/18070366 Abstract]] | [[http://www.biomedcentral.com/1471-2105/8/475/abstract Read the paper ]]| [[http://www.aporc.org/doc/wiki/PSN Software and Webpage]]
~- Full list of paper can be found [[http://zhangroup.aporc.org/YongWang/files.xml?action=download&file=Yong+Wang+Vitae.pdf Here]]. Papers in bioinformatics and systems biology can be found in [[http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=DetailsSearch&term=Wang+Yong PubMed]]
::c::----
Additions:
特别研究员, [[http://www.cbrc.jp/index.eng.html 计算生物学研究中心]], [[http://www.aist.go.jp/index_en.html 日本产业技术综合研究所]]
Deletions:
Additions:
~- [[http://www.cbrc.jp/eng/organization/team_network.eng.html Prof. Horimoto's Team]]
Additions:
Research staff of [[http://www.cbrc.jp/index.eng.html The Computational Biology Research Center (CBRC)]], [[http://www.aist.go.jp/index_en.html National Institute of Advanced Industrial Science and Technology (AIST), Japan]]
特别研究员, [[[http://www.cbrc.jp/index.eng.html 计算生物学研究中心]], [[http://www.aist.go.jp/index_en.html 日本产业技术综合研究所]]
特别研究员, [[[http://www.cbrc.jp/index.eng.html 计算生物学研究中心]], [[http://www.aist.go.jp/index_en.html 日本产业技术综合研究所]]
Additions:
Research associate professor of [[http://www.amt.ac.cn Institute of Applied Mathematics]], [[http://www.amss.ac.cn Academy of Mathematics and Systems Science]]
Deletions:
Deletions:
%~- [[http://yongge.aporc.org Yongge's Homepage ]]
%~- [[http://yongge.aporc.org/gallery/ Photo Album]]
Additions:
%=== Welcome to my homepage ===
%~- [[http://yongge.aporc.org Yongge's Homepage ]]
%~- [[http://yongge.aporc.org/gallery/ Photo Album]]
%~- [[http://yongge.aporc.org Yongge's Homepage ]]
%~- [[http://yongge.aporc.org/gallery/ Photo Album]]
Deletions:
~- [[http://yongge.aporc.org Yongge's Homepage ]]
~- [[http://yongge.aporc.org/gallery/ Photo Album]]
Additions:
~- [[www.ncbi.nlm.nih.gov/pubmed/ PubMed]]
Additions:
=== Research Philosophy===
~- Think globally, act locally
~- As simple as possible, but no simpler
~- Hacker spirit
~- Think globally, act locally
~- As simple as possible, but no simpler
~- Hacker spirit
Additions:
~- [[http://nook.cs.ucdavis.edu/~koehl/BioEbook/ Bio eBook]]
Deletions:
Additions:
~- [[http://nook.cs.ucdavise.edu/~koehl/BioEBook/ Bio eBook]]
Additions:
~- [[http://multimedia.mcb.harvard.edu/innerHi.swf Inner Life of the Cell]]
Additions:
~- [[http://intelligent.eic.osaka-sandai.ac.jp/ Chen Lab]]
~- [[http://xialab.bu.edu Yu Xia Lab]]
~- [[http://xialab.bu.edu Yu Xia Lab]]
Additions:
~- [[http://apps.newisiknowledge.com/UA_GeneralSearch.do ISI Web of Knowledge]]
Additions:
=== Links ===
~- [[http://scholar.google.com Google Scholar]]
~- [[http://scholar.google.com Google Scholar]]
Additions:
{{files}}
Additions:
~- {{files download="Yong Wang Vitae Chinese.pdf" text="科研简历 (PDF)"}}
~- {{files download="Yong Wang Vitae.pdf" text="Curriculum Vitae (PDF)"}}
~- {{files download="Yong Wang Vitae.pdf" text="Curriculum Vitae (PDF)"}}
Deletions:
~- Curriculum Vitae (PDF)
{{files}}
Additions:
====== 王 勇 博士 ======
Deletions:
Additions:
=== Vitae ===
~- 个人简历 (PDF)
~- Curriculum Vitae (PDF)
{{files}}
{{files}}
~- 个人简历 (PDF)
~- Curriculum Vitae (PDF)
{{files}}
{{files}}
Additions:
=== Research Interests===
~- Optimization
~- Bioinformatics
~- Systems biology
~- Optimization
~- Bioinformatics
~- Systems biology
Additions:
Tel: +86(10)-62616659
Deletions:
Additions:
Research assistant professor of [[http://www.amt.ac.cn Institute of Applied Mathematics]], [[http://www.amss.ac.cn Academy of Mathematics and Systems Science]]
助理研究员, [[http://www.amt.ac.cn 应用数学研究所]], [[http://www.amss.ac.cn 数学与系统科学研究院]], [[http://www.cas.ac.cn 中国科学院]]
Email: ""<a href="mailto:ywang@amss.ac.cn">ywang@amss.ac.cn</a>""
Tel: +86(10)-62571860
助理研究员, [[http://www.amt.ac.cn 应用数学研究所]], [[http://www.amss.ac.cn 数学与系统科学研究院]], [[http://www.cas.ac.cn 中国科学院]]
Email: ""<a href="mailto:ywang@amss.ac.cn">ywang@amss.ac.cn</a>""
Tel: +86(10)-62571860
Deletions:
博士后,[[http://www.sic.gov.cn 国家信息中心]]
Email: ""<a href="mailto:ywang@ctex.org">ywang@ctex.org</a>""
Tel: +86(10)-68557136
Additions:
""<img src="images/users/yongwang.jpg" style="float: right; margin: 1.0%; padding: 0.5%;">""
Deletions:
Additions:
~- [[http://yongge.aporc.org Yongge's Homepage ]]
Deletions:
Additions:
Tel: +86(10)-68557136
Deletions:
Additions:
Email: ""<a href="mailto:ywang@ctex.org">ywang@ctex.org</a>""
Deletions:
Additions:
Email: <a href="mailto:ywang@ctex.org">ywang@ctex.org</a>""
Deletions:
Additions:
Email: <a href="mailto:ywang@ctex.org">Email Me</a>""
Deletions:
Additions:
""<img src="uploads/UserImages/yongwang.jpg" style="float: right; margin: 1.0%; padding: 0.5%;">""
====== Dr. Yong Wang======
====== 王勇 博士 ======
Postdoc of [[http://www.sic.gov.cn State Information Center]]
博士后,[[http://www.sic.gov.cn 国家信息中心]]
Email: ""<a href="mailto:ywang@amss.ac.cn">ywang@amss.ac.cn</a>""
Tel: (+86)010-68557136
=== Welcome to my homepage ===
~- [[http://yongge.aporc.org Yong Wang ]]
~- [[http://yongge.aporc.org/gallery/ Photo Album]]
====== Dr. Yong Wang======
====== 王勇 博士 ======
Postdoc of [[http://www.sic.gov.cn State Information Center]]
博士后,[[http://www.sic.gov.cn 国家信息中心]]
Email: ""<a href="mailto:ywang@amss.ac.cn">ywang@amss.ac.cn</a>""
Tel: (+86)010-68557136
=== Welcome to my homepage ===
~- [[http://yongge.aporc.org Yong Wang ]]
~- [[http://yongge.aporc.org/gallery/ Photo Album]]
Deletions:
==My name is Wang Yong 王勇==
~- [[http://yongge.aporc.org Yong Wang ]]
Additions:
==My name is Wang Yong 王勇==
Additions:
=== Welcome to Yong Wang's Homepage ===
Deletions:
Additions:
=== Welcomt to Yong Wang's Homepage ===
Deletions:
Additions:
=== Yong Wang's Homepage ===
~- [[http://yongge.aporc.org Yong Wang ]]
~- [[http://yongge.aporc.org Yong Wang ]]