Revision history for PubBioinformatics2013
Additions:
~1) Shao-Yan Sun, Zhi-Ping Liu, Tao Zeng, Yong Wang*, and Luonan Chen*. --- ** [[http://www.nature.com/srep/2013/130724/srep02268/full/srep02268.html Spatio-temporal analysis of type 2 diabetes mellitus based on differential expression networks. ]]**--- //Scientific Report//, 3, 2268; 2013.
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~1) Zhi-Ping Liu, Wanwei Zhang, Katshisa Horimoto, Luonan Chen.--- ** [[http://digital-library.theiet.org/content/journals/10.1049/iet-syb.2012.0062 Gaussian graphical model for identifying significantly responsive regulatory networks from time course high-throughput data. ]]**--- //IET Systems Biology//, 2013, Vol. 7. No. 5. 143-152.
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~1) Zhi-Ping Liu, Wanwei Zhang, Katshisa Horimoto, Luonan Chen.--- ** [[http://digital-library.theiet.org/content/journals/10.1049/iet-syb.2012.0062 Gaussian graphical model for identifying significantly responsive regulatory networks from time course high-throughput data. ]]**--- //IET Systems Biology//, 2013, Vol. 7. No. 5. 143--152.
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~1) Zhi-Ping Liu, Wanwei Zhang, Katshisa Horimoto, Luonan Chen.--- ** [[http://nar.oxfordjournals.org/content/41/4/e53.long Gaussian graphical model for identifying significantly responsive regulatory networks from time course high-throughput data. ]]**--- //IET Systems Biology//, 2013, Vol. 7. No. 5. 143--152.
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~1) Qiang Huang, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang. ---**[[http://www.ncbi.nlm.nih.gov/pubmed/23237213 GOMA: functional enrichment analysis tool based on GO modules.]]**--- //Chin J Cancer//, 32(4):195-204, 2013.
Additions:
~1) Shao-Yan Sun, Tao Zeng, Zhi-Ping Liu, Yong Wang*, and Luonan Chen*. --- ** [[http://www.nature.com/srep/2013/130724/srep02268/full/srep02268.html Spatio-temporal analysis of type 2 diabetes mellitus based on differential expression networks. ]]**--- //Scientific Report//, 3, 2268; 2013.
~1) Xianwen Ren, Yong Wang*, Xiang-Sun Zhang, and Qi Jin.--- ** [[http://nar.oxfordjournals.org/content/early/2013/06/12/nar.gkt343.full iPcc: a novel feature extraction method for accurate disease class discovery and prediction.]]**--- //Nucleic Acids Research//. 2013 Vol. 41, No. 4, e143.
~1) Yongcui Wang, Nai-Yang Deng, Shi-Long Chen, Yong Wang*. --- ** [[http://bioinformatics.oxfordjournals.org/content/early/2013/04/04/bioinformatics.btt158.long Network predicting drug's anatomical therapeutic chemical code. ]]**--- //Bioinformatics//, 2013 29: 1317-1324.
~1) Yong Wang. --- ** [[http://www.ingentaconnect.com/content/ben/cbio/2013/00000008/00000001/art00013 Bioinformatics studies on induced pluripotent stem cell. ]]**--- //Current Bioinformatics//, 2013, Vol. 8. No. 1. 80--87.
~1) Xianwen Ren, Yong Wang*, Luonan Chen, Xiang-Sun Zhang, and Qi Jin.--- ** [[http://nar.oxfordjournals.org/content/41/4/e53.long ellipsoidFN: a tool for identifying a heterogeneous set of cancer biomarkers based on gene expressions]]**--- //Nucleic Acids Research//. 2013 41(4): e53.
~1) Xianwen Ren, Yong Wang*, Xiang-Sun Zhang, and Qi Jin.--- ** [[http://nar.oxfordjournals.org/content/early/2013/06/12/nar.gkt343.full iPcc: a novel feature extraction method for accurate disease class discovery and prediction.]]**--- //Nucleic Acids Research//. 2013 Vol. 41, No. 4, e143.
~1) Yongcui Wang, Nai-Yang Deng, Shi-Long Chen, Yong Wang*. --- ** [[http://bioinformatics.oxfordjournals.org/content/early/2013/04/04/bioinformatics.btt158.long Network predicting drug's anatomical therapeutic chemical code. ]]**--- //Bioinformatics//, 2013 29: 1317-1324.
~1) Yong Wang. --- ** [[http://www.ingentaconnect.com/content/ben/cbio/2013/00000008/00000001/art00013 Bioinformatics studies on induced pluripotent stem cell. ]]**--- //Current Bioinformatics//, 2013, Vol. 8. No. 1. 80--87.
~1) Xianwen Ren, Yong Wang*, Luonan Chen, Xiang-Sun Zhang, and Qi Jin.--- ** [[http://nar.oxfordjournals.org/content/41/4/e53.long ellipsoidFN: a tool for identifying a heterogeneous set of cancer biomarkers based on gene expressions]]**--- //Nucleic Acids Research//. 2013 41(4): e53.
Additions:
~1) Zhong-Yuan Zhang --- **[[http://info.scichina.com:8083/sciFe/EN/abstract/abstract511376.shtml Community structure detection in social networks based on dictionary learning]]** --- //Science China: Information Science//, 56 (7): 078103(12), 2013
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~1) Zhong-Yuan Zhang --- **[[http://info.scichina.com:8083/sciFe/EN/abstract/abstract511376.shtml Community structure detection in social networks based on dictionary learning]]** --- //Science China: Information Science//, 56(7): 078103(12), 2013
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~1) Zhong-Yuan Zhang --- **[[http://info.scichina.com:8083/sciFe/EN/abstract/abstract511376.shtml Community Structure Detection in Social Networks Based on Dictionary Learning]]** --- //Science China: Information Science//, 56(7): 078103(12), 2013
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~1) Zhong-Yuan Zhang --- **Community Structure Detection in Social Networks Based on Dictionary Learning.** --- //Science China: Information Science//, in press.
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~1) Zhong-Yuan Zhang, --- **[[http://iopscience.iop.org/0295-5075/101/4/48005?fromSearchPage=true Community structure detection in complex networks with partial background information.]]** --- //EPL (Europhysics Letters)//, 101 (4): 48005, 2013
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Additions:
~1) Zhong-Yuan Zhang, --- **[[http://club.kdnet.net/dispbbs.asp?id=8894673&boardid=1 Community structure detection in complex networks with partial background information.]]** --- //EPL (Europhysics Letters)//, 101 (4): 48005, 2013
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Additions:
~1) Zhong-Yuan Zhang, Tao Li, Chris Ding, --- **[[http://link.springer.com/article/10.1007%2Fs10115-011-0460-y Non-negative Tri-factor tensor decomposition with applications.]]** --- //Knowledge and Information Systems//, 34 (2): 243-265, 2013
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~1) Zhong-Yuan Zhang, Yong Wang, Yong-Yeol Ahn, --- **[[http://pre.aps.org/abstract/PRE/v87/i6/e062803 Overlapping community detection in complex networks using symmetric binary matrix factorization.]]** --- //Physical Review E//, 87 (6): 062803, 2013
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binary matrix factorization. --- //Physical Review E//, 2013
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Additions:
~1) Zhong-Yuan Zhang, Yong Wang, Yong-Yeol Ahn, --- Overlapping community detection in complex networks using symmetric
binary matrix factorization. --- //Physical Review E//, 2013
binary matrix factorization. --- //Physical Review E//, 2013
Additions:
~1) Zhong-Yuan Zhang, Tao Li, Chris Ding, Jie Tang, --- A NMF-framework for Unifying Posterior Probabilistic Clustering and Probabilistic Latent Semantic Indexing. --- //Communications in Statistics-Theory and Methods//, 2013
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~1) Zhong-Yuan Zhang, Tao Li, Chris Ding, Jie Tang, --- ** A NMF-framework for Unifying Posterior Probabilistic Clustering and Probabilistic Latent Semantic Indexing.** --- //Communications in Statistics-Theory and Methods//, 2013
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~1) Zhong-Yuan Zhang, Tao Li, Chris Ding, Jie Tang, --- ** long A NMF-framework for Unifying Posterior Probabilistic Clustering and Probabilistic Latent Semantic Indexing.** --- //Communications in Statistics-Theory and Methods//, 2013
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~1) Zhong-Yuan Zhang, Tao Li, Chris Ding, Jie Tang, --- ** [long A NMF-framework for Unifying Posterior Probabilistic Clustering and Probabilistic Latent Semantic Indexing.]** --- //Communications in Statistics-Theory and Methods//, 2013
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~1) Zhong-Yuan Zhang, Tao Li, Chris Ding, Jie Tang, --- **[[long A NMF-framework for Unifying Posterior Probabilistic Clustering and Probabilistic Latent Semantic Indexing.]]** --- //Communications in Statistics-Theory and Methods//, 2013
Additions:
~1) Zhong-Yuan Zhang, --- **[[http://iopscience.iop.org/0295-5075/101/4/48005.long Community structure detection in complex networks with partial background information.]]** --- //EPL (Europhysics Letters)//, 101 (4): 48005, 2013
Additions:
~1) Zhong-Yuan Zhang, Tao Li, Chris Ding, --- **[[http://link.springer.com/article/10.1007/s10115-011-0460-y.long Non-negative Tri-factor tensor decomposition with applications.]]** --- //Knowledge and Information Systems//, 34 (2): 243-265, 2013
Additions:
~1) Ying Wang, Xiaowei Chen, Zhi-Ping Liu, Qiang Huang, Yong Wang, Derong Xu, Xiang-Sun Zhang, Runsheng Chen, Luonan Chen --- ** [[http://pubs.rsc.org/en/Content/ArticleLanding/2013/MB/c2mb25292a De novo prediction of RNA-protein interactions from sequence information.]]** ---//Molecular Biosystems//, 9(1):133-142, 2013.
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Additions:
~2) Ying Wang, Xiaowei Chen, Zhi-Ping Liu, Qiang Huang, Yong Wang, Derong Xu, Xiang-Sun Zhang, Runsheng Chen, Luonan Chen --- ** [[http://pubs.rsc.org/en/Content/ArticleLanding/2013/MB/c2mb25292a De novo prediction of RNA-protein interactions from sequence information.]]** ---//Molecular Biosystems//, 9(1):133-142, 2013.
Deletions:
Additions:
~1) Ying Wang, Xiaowei Chen, Zhi-Ping Liu, Qiang Huang, Yong Wang, Derong Xu, Xiang-Sun Zhang, Runsheng Chen, Luonan Chen --- ** [[http://pubs.rsc.org/en/Content/ArticleLanding/2013/MB/c2mb25292a De novo prediction of RNA-protein interactions from sequence information.]]** ---//Molecular Biosystems//, 9(1):133-142, 2013.