Publications - Bioinformatics 2013


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Books & Chapters



Accepted Papers

  1. Zhong-Yuan Zhang, Tao Li, Chris Ding, Jie Tang,
    A NMF-framework for Unifying Posterior Probabilistic Clustering and Probabilistic Latent Semantic Indexing.
    Communications in Statistics-Theory and Methods, 2013


Refereed Journal Papers

  1. Qiang Huang, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang.
    GOMA: functional enrichment analysis tool based on GO modules.
    Chin J Cancer, 32(4):195-204, 2013.
  2. Shao-Yan Sun, Zhi-Ping Liu, Tao Zeng, Yong Wang*, and Luonan Chen*.
    Spatio-temporal analysis of type 2 diabetes mellitus based on differential expression networks.
    Scientific Report, 3, 2268; 2013.
  3. Xianwen Ren, Yong Wang*, Xiang-Sun Zhang, and Qi Jin.
    iPcc: a novel feature extraction method for accurate disease class discovery and prediction.
    Nucleic Acids Research. 2013 Vol. 41, No. 4, e143.
  4. Yongcui Wang, Nai-Yang Deng, Shi-Long Chen, Yong Wang*.
    Network predicting drug's anatomical therapeutic chemical code.
    Bioinformatics, 2013 29: 1317-1324.
  5. Yong Wang.
    Bioinformatics studies on induced pluripotent stem cell.
    Current Bioinformatics, 2013, Vol. 8. No. 1. 80--87.
  6. Xianwen Ren, Yong Wang*, Luonan Chen, Xiang-Sun Zhang, and Qi Jin.
    ellipsoidFN: a tool for identifying a heterogeneous set of cancer biomarkers based on gene expressions
    Nucleic Acids Research. 2013 41(4): e53.
  7. Wei Song*, Jiguang Wang*, Ying Yang, Nai-He Jing, Xiang-Sun Zhang, Luonan Chen, Jia-Rui Wu
    Rewiring drug-activated p53-regulatory network from suppressing to promoting tumorigenesis.
    Journal of Molecular Cell Biology, doi:10.1093/jmcb/mjs029 (* co-first authors).
  8. Ying Wang, Xiaowei Chen, Zhi-Ping Liu, Qiang Huang, Yong Wang, Derong Xu, Xiang-Sun Zhang, Runsheng Chen, Luonan Chen
    De novo prediction of RNA-protein interactions from sequence information.
    Molecular Biosystems, 9(1):133-142, 2013.
  9. Zhong-Yuan Zhang,
    Community structure detection in complex networks with partial background information.
    EPL (Europhysics Letters), 101 (4): 48005, 2013
  10. Zhong-Yuan Zhang, Tao Li, Chris Ding,
    Non-negative Tri-factor tensor decomposition with applications.
    Knowledge and Information Systems, 34 (2): 243-265, 2013
  11. Zhong-Yuan Zhang, Yong Wang, Yong-Yeol Ahn,
    Overlapping community detection in complex networks using symmetric binary matrix factorization.
    Physical Review E, 87 (6): 062803, 2013
  12. Zhong-Yuan Zhang
    Community structure detection in social networks based on dictionary learning
    Science China: Information Science, 56 (7): 078103(12), 2013

Proceedings Papers



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