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This is an old revision of HuangQiang made by HuangQiang on 2016-12-01 17:37:47.

 

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Dr. Qiang Huang


Postdoctoral Research Scientist

Department of Systems Biology

Columbia University

1130 St Nicholas Avenue, 8 floor
New York, NY 10032
Email: h510493094@qq.com
hq04405114@gmail.com




Education Background
2016,5~now Data Analysis Scientist
2014,8~2016,4 Postdoc, Department of Systems Biology, Department of Biomedical Informatics, Columbia University.
2009,9~2014,7 Phd student, Institute of Applied Mathematics, Academy of Mathematics & Systems Science, Chinese Academy of Sciences, Operation Research.
2005,9~2009,7 Bachelor student, China University of Geosciences, mathematics and applied mathematics.


Research Areas
Undirected Graphical Models.
Bayes Networks.
Hidden Markov Models.
Algorithms.
Conditional Random Fields and its applications in bioinformatics.

Award

Interests
Computer Language: java, R, Matlab, python
Computer Software: Photoshop, Flash

Publications and Book
  1. Qiang Huang, Ling-Yun Wu, and Xiang-Sun Zhang.
    An Efficient Network Querying Method Based on Conditional Random Fields.
    Bioinformatics, doi:10.1093/bioinformatics/btr524, 2011.
  2. Jiguang Wang, Qiang Huang, Zhi-Ping Liu, Yong Wang, Ling-Yun Wu, Luonan Chen, and Xiang-Sun Zhang
    NOA: a novel Network Ontology Analysis method.
    Nucleic Acids Research, 39(13):e87, 2011.
  3. Qiang Huang, Ling-Yun Wu, Ji-Bin Qu, Xiang-Sun Zhang.
    Analyzing Time-Course Gene Expression Data Using Profile-State Hidden Markov Model.
    2011 IEEE International Conference on Systems Biology (ISB), pp. 351-355.
  4. Chen Chen, Jun-Fei Zhao, Qiang Huang, Rui-Sheng Wang, Xiang-Sun Zhang.
    Inferring Domain-Domain Interactions Using an Extended Parsimony Model.
    2011 IEEE International Conference on Systems Biology (ISB), pp. 385-389.
  5. Chen Chen, Jun-Fei Zhao, Qiang Huang, Rui-Sheng Wang, Xiang-Sun Zhang.
    Inferring domain-domain interactions from protein-protein interactions in the complex network conformation.
    BMC Systems Biology, 2012, 6(Suppl 1):S7.
  6. Qiang Huang, Ling-Yun Wu, and Xiang-Sun Zhang.
    CNetA: Network alignment by combing biological and topological features.
    2012 IEEE International Conference on Systems Biology (ISB), pp. 220-225. (Best paper)
  7. Ying Wang, Xiaowei Chen, Zhi-Ping Liu, Qiang Huang, Yong Wang, Derong Xu, Xiang-Sun Zhang, Runsheng Chen and Luonan Chen.
    De novo prediction of RNA-protein interactions from sequence information.
    Mol. BioSyst., DOI: 10.1039/c2mb25292a, 2013.
  8. Qiang Huang, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang.
    GOMA: functional enrichment analysis tool based on GO modules.
    Chin J Cancer, 32(4):195-204, 2013.
  9. Qiang Huang, Ling-Yun Wu, and Xiang-Sun Zhang.
    Corbi: A new R package for biological network alignment and querying.
    BMC Systems Biology, 2013, 7(Suppl 2):S6.
  10. Xu Y, Ding J, Huang Q, Nai-Yang D.
    Prediction of Protein Methylation Sites Using Conditional Random Field.
    Protein and Peptide Letters, 2013, 20(1): 71-77.

Hobbies
Reading
sports
tourism


Links

http://zhangroup.aporc.org/HomePage
http://app.aporc.org/CNetQ/
http://app.aporc.org/CNetA/
http://app.aporc.org/NOA/
http://aloft.ctex.org/
http://aloft.ctex.org/wiki/R%20Packages
http://zhaojunfei.net/
Google Scholar
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