From Protein Surface Pattern to Function

• Predicting Gene Ontology functions from Protein's Regional Surface Structures
  
  Deletions:
  
  
  

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  Edited on 2007-06-16 10:08:28 by YongWang
  
  Additions:
  

  Protein Structure Comparison

• Evaluating Protein Similarity From Coarse Structures

Molecular Networks Alignment

• MNAligner (Molecular Network Aligner)
  
  

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  Edited on 2006-09-01 11:45:37 by LingyunWu
  
  Additions:
  ~- GNTInfer (Gene Network reconstruction tool with compound Targets)
  
  

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  Edited on 2006-03-27 14:00:42 by LingyunWu
  
  Additions:
  

  Protein-Protein Interaction Inference

• DeterminePPI (Inferring protein-protein interactions by parsimony principle)
  
  

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  Edited on 2006-03-27 13:58:47 by LingyunWu
  
  Additions:
  

  Protein-Protein Interaction Networks

• Alignment of Protein Interaction Networks by Integer Quadratic Programming
  
  Deletions:
  

  Protein Protein Interaction Networks

  
  
  

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  Edited on 2006-03-23 17:59:34 by LingyunWu
  
  Additions:
  

  Resources of Bioinformatics

  
  
  Deletions:
  

  Resources of Bioinformatics on this website

  
  
  

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  Edited on 2006-01-09 12:13:15 by LingyunWu
  
  Additions:
  CategoryResource
  
  

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  Edited on 2006-01-03 16:20:44 by LingyunWu
  
  Additions:
  

  Gene Regulatory Network Inference

• GRNInfer (Gene Regulatory Network Inference Tool)
  
  

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  Edited on 2005-12-12 17:37:47 by LingyunWu
  
  No differences.
  

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  Edited on 2005-12-12 17:37:33 by LingyunWu
  
  Additions:
  

  Supplementary Materials

Protein Protein Interaction Networks

• Identification of functional modules in PPI network by clique percolation clustering
  
  

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  Edited on 2005-05-27 08:54:10 by LingyunWu
  
  Additions:
  ~- ZG-TK-03-01 Protein Structure Prediction & Alignment (Simplified version)
• ZG-TK-03-02 Reconstruction of DNA Sequencing by Hybridization
• ZG-TK-03-03 Self-organizing Map (SOM) in Protein Folding Based on HP Model
• ZG-TK-03-04 Center of Bioinformatics at AMSS (in Chinese)
• ZG-TK-05-01 Deterministic Optimization Methods For the Haplotyping Problem
• ZG-LC-03-01 The Haplotype Blocks Problems
• ZG-LC-03-02 Structure Alignment of Protein
• ZG-LC-03-03 Protein Structure Alignment
• ZG-LC-03-04 Protein Threading for Structure Prediction
• ZG-LC-03-05 Protein Threading
  
  Deletions:
  ~- ZG-TK-03-01 Protein Structure Prediction & Alignment (Simplified version)
• ZG-TK-03-02 Reconstruction of DNA Sequencing by Hybridization
• ZG-TK-03-03 Self-organizing Map (SOM) in Protein Folding Based on HP Model
• ZG-TK-03-04 Center of Bioinformatics at AMSS (in Chinese)
• ZG-LC-03-01 The Haplotype Blocks Problems
• ZG-LC-03-02 Structure Alignment of Protein
• ZG-LC-03-03 Protein Structure Alignment
• ZG-LC-03-04 Protein Threading for Structure Prediction
• ZG-LC-03-05 Protein Threading
  
  

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  Oldest known version of this page was edited on 2005-05-24 10:21:34 by LingyunWu []
  
  Page view:

  Resources of Bioinformatics on this website

Software

Protein Structure Alignment

• Samo (protein Structure Alignment tool based on Multiple Objective optimization)

Haplotype Inference

• HMC (Haplotype inference tool based on Markov Chain model)
• PTG (Parsimonious Tree-Grow method for haplotype inference)

Talks

• ZG-TK-03-01 Protein Structure Prediction & Alignment (Simplified version)
• ZG-TK-03-02 Reconstruction of DNA Sequencing by Hybridization
• ZG-TK-03-03 Self-organizing Map (SOM) in Protein Folding Based on HP Model
• ZG-TK-03-04 Center of Bioinformatics at AMSS (in Chinese)

Internal Lectures

• ZG-LC-03-01 The Haplotype Blocks Problems
• ZG-LC-03-02 Structure Alignment of Protein
• ZG-LC-03-03 Protein Structure Alignment
• ZG-LC-03-04 Protein Threading for Structure Prediction
• ZG-LC-03-05 Protein Threading

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