Publications - Bioinformatics 2014


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Books & Chapters



Accepted Papers

  1. Yongcui Wang, Nai-Yang Deng, Shi-Long Chen, and Yong Wang.
    Computational Study of Drugs by Integrating Omics Data with Kernel Methods
    Molecular Informatics. in press, 2014.
  2. Zhongkai Hu, Bo Jin, Andrew Young Shin, Chunqing Zhu, Yifan Zhao, Shiying Hao, Le Zheng, Changlin Fu, Qiaojun Wen, Jun Ji, Zhen Li, Yong Wang, Xiaolin Zheng, Dorothy Dai, Devore S Culver, Shaun T Alfreds, Todd Rogow, Frank Stearns, Karl G Sylvester, Eric Widen, Xuefeng Ling.
    Real Time Online Assessment of Total Population Risk of Future ED Utilizations: A Statewide Prospective Active Case Finding Study
    Interactive Journal of Medical Research, In press, 2014.

Refereed Journal Papers

  1. Pengjun Zhang, Meng Zou, Xinyu Wen, Feng Gu, Juan Li, Gaixia Liu, Jingxiao Dong, Xinxin Deng, Jing Gao, Xiaolong Li, Xingwang Jia, Zhennan Dong, Luonan Chen, Yong Wang, Yaping Tian.
    Development of Serum Parameters Panels for the Early Detection of Pancreatic Cancer
    International Journal of Cancer, 134(11):2646-55, 2014.
  2. NCI-DREAM Community, Zhana Duren, Yong Wang, Junfei Zhao, Shihua Zhang, and Xiang-Sun Zhang are listed as co-authors).
    A community effort to assess and improve drug sensitivity prediction algorithms
    Nature Biotechnology. 32, 1202–1212, 2014.
  3. Wenjun Mou, Zhaoqi Liu,Yuan Luo, Meng Zou, Chao Ren, Chunyan Zhang, Xinyu Wen, Yong Wang, Yaping Tian.
    Development and cross-validation of prognostic models to assess the treatment effect of cisplatin/pemetrexed chemotherapy in lung adenocarcinoma patients
    Medical oncology, 31(9):59, 2014;
  4. Lin Wang, Yong Wang, Qinghua Hu, Shao Li.
    Systematic analysis of new drug indications by drug-gene-disease coherent subnetworks.
    CPT: Pharmacometrics & Systems Pharmacology, 3, e146; 2014.
  5. Evangelos Pefanis*, Jiguang Wang*, Gerson Rothschild*, Junghyun Lim, Jaime Chao, Raul Rabadan, Aris N. Economides, Uttiya Basu
    Noncoding RNA transcription targets AID to divergently transcribed loci in B cells
    Nature, doi:10.1038/nature13580, 2014. (* co-first authors).
  6. Jiguang Wang*
    The research on molecular network models of complex disease (in Chinese).
    Sci Sin Math, 44(4): 317-328, doi: 10.1360/012013-143, 2014.
  7. D Rossi, H Khiabanian, V Spina, C Ciardullo, A Bruscaggin, R Famà, Silvia Rasi, Sara Monti, Clara Deambrogi, Lorenzo De Paoli, Jiguang Wang, Valter Gattei, Anna Guarini, Robin Foà, Raul Rabadan, and Gianluca Gaidano.
    Clinical impact of small TP53 mutated subclones in chronic lymphocytic leukemia.
    Blood, blood-2013-11-539726, 2014.
  8. J Zhou, J Wu1, B Li1, D Liu, J Yu, X Yan, S Zheng, J Wang, L Zhang, L Zhang, F He, Q Li, A Chen, Y Zhang, X Zhao, Y Guan, X Zhao, J Yan1, J Ni, M A Nobrega, B Löwenberg, R Delwel, P J M Valk, A Kumar, L Xie, D G Tenen, G Huang and Q-f Wang.
    PU. 1 is essential for MLL leukemia partially via crosstalk with the MEIS/HOX pathway.
    Leukemia, doi: 10.1038/leu.2013.384, 2014.
  9. Zhaoqi Liu, Xiang-Sun Zhang, Shihua Zhang.
    Breast tumour subgroups reveal diverse clinical predictive power.
    Scientific Report, (2014), 4: 4002.
  10. Junfei Zhao, Xiang-Sun Zhang, Shihua Zhang
    Predicting cooperative drug effects by the quantitative cellular profiling of response to individual drugs.
    CPT: Pharmacometrics and Systems Pharmacology, (2014), 3: e102.
  11. Junhua Zhang, Ling-Yun Wu, Xiang-Sun Zhang and Shihua Zhang
    Discovery of co-occurring driver pathways in cancer.
    BMC bioinformatics,(2014), 15 (1), 271.
  12. Jiguang Wang#, Hossein Khiabanian, Davide Rossi, Giulia Fabbri, Valter Gattei, Francesco Forconi, Luca Laurenti, Roberto Marasca, Giovanni Del Poeta, Robin Foà, Laura Pasqualucci, Gianluca Gaidano, Raul Rabadan#
    Tumor evolutionary directed graphs and the history of chronic lymphocytic leukemia
    eLife, DOI:10.7554/eLife.02869, 2014. (#corresponding authors).

Proceedings Papers



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